Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0093 ATGGAAGAAGAAACGTGGCGACTCACGCGATCAAAGCTGCGCATGGTGGTTTTCATGGTGATAATATCTCTGTTTTCTCTGACAGCAAAACAGAGCCTCTCTTCGCCTCTGAACAGCCAAGGTTTAGCGTTGCTGATGTTCAGAGACAGAGTTGTGAGCGACCCATTTGGAGCTTTATCGAATTGGAATGCCAACGACGGAGTCATTGATCCGTGTTCGTGGTTCGGGGTGGAGTGTTCCGAAGGAAAAATCGTTACCTTGAATTTGAAAGGCCATCGTCTTCAAGGAACAATAGCCCCTGAAATTGGGAAGCTGACTCACATAAAATCCATAATTTTGCGCAACAATTCTTTCCATGGAGAAATACCCAAGGAGATGTTACAATTAGAGGAACTGGAAGTTCTTGACCTGGGATATAACAACTTTAGTGGATCATTTCCATCTGAAAATAAAAGCAATCTATCCCTGACTACCCTTTTACTGGACAACAATGATTATCTGACCTACTTGACCCCAGAAGTATATAAGCTCAAGATGATGTCTGAATCTCATGAAGAACAACTAGCTGGTGGTGCCAGTACTAAAGCAGCATGTATGAGCAGATCTAGTTTCTGGTACAAGAAGAGGCAACTTCTTCAAGTAGAAAATCCTCCCTCTTCATTACCACCAGATTCTGAGCCTTTCTCACCATCTCCTTTATCAGTTTCACCACCCGAACCTGCCTTTAATTCTCCATCTGCATCAGCTCCCATATCCTTTCCACCATCACCATCTCCCTCCGCCATTTTTCTCCCTCCTTCACCCTCACCTGCATCTTCACTTTCACCTTCACCTTCACCTATTATAGCACCAACTCCTGAAATATCATCACTTCCAGCAAATCCACCTGTAGTTGGGTCCACGCCACCAGAGTCCAATTGGGTTTCATCTCCTTCCCCTACTCCGTTTTCAAACCAAGGGAGTTCTAAGTCAAAGCATCGTTCAGTGATAATTTGGTCTACAGTTGGGGGCTTCTTACTGGTTTTGGTGTCAGCAACTGCTTTTGCTTGCTTCAGGAATAATAAGGTTGTAACTGTAAAACCTTGGCCCATTGGCTTGAGTGGGCAGCTCCAGAAAGCTTTCGTAACAGGTGTGCCAAATCTCAAGCGAGCAGAACTTGAAGCAGCTTGTGAAGATTTCAGCAACATTATTGGATCAGATCCGGAGGGTACAATCTATAAGGGAACTCTCTCCAGTGGAGTTGAGATAGCAGTAGTATCCACTGCTGTGACCTCATCTCAAAACTGGTCAAAGCATATGGAAGCCCAATATAGGAAGAAGTTATACACATTATCCAGAGTGAACCACAAGAACTTTGTAAATCTTATCGGATACTGTGAAGAGAAGAAGCCCTTCACAAGAATGATGGTTTTTGAGTATGCTCCAAATGGAACTCTCTTTGAACACCTACACATTAGAGAAGCAGAGCAACTTGATTGGGGAACGAGGGTGAGGATAGCTATGGGAACAGCCTACTGCCTAGAGTATATGCATCAACTAACACCACCCATTGCCCACACAAACCTAAACTCTTCCTCTATACGCCTGACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTCTGGAATGACATAGTTACTGCTGCTAAAAAGGGTTCTTCTGCAGCCACACAACTCATGGAAACACCATCAGCATATATAAAGGGCAATGTTTATAGCTTTGGGGTAATGTTATTTGAACTGATAACAGGTAAAATTCCCTATGCTGTGGACAATGGAGTTCTTGCAGATTGGGCAGCTGAATATCTAAGATGGGGAAAGAAGCCCTTTAGAGATGTAGTGGATCCAACTCTGAGCTCTTTGAAAGAAGAAGATATTGTGAAATGGTTTCAAGTGATTAAAGAATGTCTGCATGCAGACCCAGAGAAAAGACCAACCATGAGAGGGGTCACTGCTAGGTTGAAGGAAATTACTGCAATGGGGTCTGATGTAGCAACACCACAAGCATCCCCTCTTTGGTGGGCAGAGCTAGAAATTGTGTCTGGGGACTCAACTTGA 2061 0.4367 MEEETWRLTRSKLRMVVFMVIISLFSLTAKQSLSSPLNSQGLALLMFRDRVVSDPFGALSNWNANDGVIDPCSWFGVECSEGKIVTLNLKGHRLQGTIAPEIGKLTHIKSIILRNNSFHGEIPKEMLQLEELEVLDLGYNNFSGSFPSENKSNLSLTTLLLDNNDYLTYLTPEVYKLKMMSESHEEQLAGGASTKAACMSRSSFWYKKRQLLQVENPPSSLPPDSEPFSPSPLSVSPPEPAFNSPSASAPISFPPSPSPSAIFLPPSPSPASSLSPSPSPIIAPTPEISSLPANPPVVGSTPPESNWVSSPSPTPFSNQGSSKSKHRSVIIWSTVGGFLLVLVSATAFACFRNNKVVTVKPWPIGLSGQLQKAFVTGVPNLKRAELEAACEDFSNIIGSDPEGTIYKGTLSSGVEIAVVSTAVTSSQNWSKHMEAQYRKKLYTLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGTRVRIAMGTAYCLEYMHQLTPPIAHTNLNSSSIRLTEDYAAKISDLSFWNDIVTAAKKGSSAATQLMETPSAYIKGNVYSFGVMLFELITGKIPYAVDNGVLADWAAEYLRWGKKPFRDVVDPTLSSLKEEDIVKWFQVIKECLHADPEKRPTMRGVTARLKEITAMGSDVATPQASPLWWAELEIVSGDST 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0093 686 SUPERFAMILY L domain-like 39 178 - -
Dere05g0093 686 MobiDBLite consensus disorder prediction 300 322 - -
Dere05g0093 686 FunFam Inactive receptor-like serine/threonine-protein kinase 365 473 - -
Dere05g0093 686 SUPERFAMILY Protein kinase-like (PK-like) 377 655 IPR011009 -
Dere05g0093 686 FunFam Leucine-rich repeat receptor-like kinase 41 168 - -
Dere05g0093 686 Gene3D Ribonuclease Inhibitor 40 165 IPR032675 -
Dere05g0093 686 ProSiteProfiles Protein kinase domain profile. 391 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0093 686 MobiDBLite consensus disorder prediction 250 299 - -
Dere05g0093 686 PANTHER PROTEIN MALE DISCOVERER 2 17 682 - -
Dere05g0093 686 MobiDBLite consensus disorder prediction 220 239 - -
Dere05g0093 686 MobiDBLite consensus disorder prediction 215 322 - -
Dere05g0093 686 Gene3D Phosphorylase Kinase; domain 1 368 473 - -
Dere05g0093 686 Pfam Leucine rich repeat N-terminal domain 38 80 IPR013210 -
Dere05g0093 686 Gene3D Transferase(Phosphotransferase) domain 1 474 668 - -
Dere05g0093 686 Pfam Protein tyrosine and serine/threonine kinase 394 654 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0093 Dere-ChrDere05 1183434 1189603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0093 21 662 Receptor kinase-like Gene Family AT2G01210 26.057 5.45e-47 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dere05g0093 PK_Tyr_Ser-Thr 1e-25 CL0016