Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0092 ATGTCCACTTCCACGGATGATATTGCTACTCCTCGCACTACTTCCTTATTCAAAACTTGTTTCCATGGAGTCAATGGCATTTCAGGGATTGGGATAGTATCTATACCTTATGCACTAGCATCAGGAGGATGGCTAAGCTTGATACTTCTGTTCATCATAGCCATCGCAGCCTATTACACAGGCATACTGATAAAAAGATGCATGGACAATGACTCCACAATAGAGTCTCTTCCTGACATAGGGCAACGTGCATTTGGAGAGAAGGGAAGGTTGATGGTAAATATAGCCATGAACTGTGAACTTTATTTGGTTGTTACAGGTTACCTTATTCTGGAAGGAGACAACCTCAACAAGTTGATATCAAACGTGCACGTGGACATAGGAGGAATAAGAATCGGCGGAACACAGTGTTTTGTTATTCTTACTGCTCTTATCATTATGCCAACTGTTTGGTTGGAGGATCTAAGCCTTCTTTCTTATGTGTCTGCCACTGGGGCTTTGGCTTCAACAGTATTTCTTTGTGCTTTGTTATGGAATGGTGCAGTTGATGGAACAGGGTTTCATTGCAAAGGCATTCTTTTTAACTGGAAAGGACTGCCTGCTGCTGTCAGCTTATATGCCTTCTGCTACAGCGCTCATCCTGTTTTTCCTAATCTTTACACTTCTATGAAGAACAAACATCAGTTCTCCAATGTCCTGCTTGTGTGCTTTACACTATGCACCTTAGTATATGCAGCAATAGCAATTCTGGGTTACTTAATGTTCGGATCTGAAGTTCAATCAGAAATAACCTTGAATCTTCCAAAAGGCAAGCTAAGCTCAAAGGTGGCAATTTACACAACCTTGGTGAATCCTATAACCAAATATGCTTTAATGCTTACCCCAATTGTGGATGCCATAAAGAACACAATTCCTTCTAGTTACAACAAGAAAAAAGCCTCACATTTACTTCTCAGTACATCCTTACTAATCAGCACTGTGATCGTAGCCCTATCTGTTCCATTTTTTGGATATTTAATGTCTCTGGTTGGAGCTTTGTTAAGTGTTTCAGCTTCATTTCTTGTGCCATCTGTTTGCTACTTGAAGATTTCAGGGCATTATCGAATATTTGGATGGGATATGATCATCAATTATGCAATCATCCTTATGGGCGTTTCAATTGCAACAGTGGGAACTTACACTTCCTTACTGGAAATTATTAAACACTTGAAAATGTAA 1218 0.3982 MSTSTDDIATPRTTSLFKTCFHGVNGISGIGIVSIPYALASGGWLSLILLFIIAIAAYYTGILIKRCMDNDSTIESLPDIGQRAFGEKGRLMVNIAMNCELYLVVTGYLILEGDNLNKLISNVHVDIGGIRIGGTQCFVILTALIIMPTVWLEDLSLLSYVSATGALASTVFLCALLWNGAVDGTGFHCKGILFNWKGLPAAVSLYAFCYSAHPVFPNLYTSMKNKHQFSNVLLVCFTLCTLVYAAIAILGYLMFGSEVQSEITLNLPKGKLSSKVAIYTTLVNPITKYALMLTPIVDAIKNTIPSSYNKKKASHLLLSTSLLISTVIVALSVPFFGYLMSLVGALLSVSASFLVPSVCYLKISGHYRIFGWDMIINYAIILMGVSIATVGTYTSLLEIIKHLKM 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0092 405 PANTHER OS05G0424000 PROTEIN-RELATED 21 391 - -
Dere05g0092 405 Pfam Transmembrane amino acid transporter protein 12 395 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0092 Dere-ChrDere05 1163604 1165707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0092 13 400 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.216 1.15e-162 461