Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0087 ATGGGAGACCCGGTAGAAAGAAAGCAACAACCATACCGTCCAATCAAAACAACCTGGCCCCACATCTCTCTCCAAAACGACACCCCATGCCCACCGTTTTCACACTTCCATCCATTTCTCTCCGTCCATCGTCGTCACCATCACAATTCACAGAAACCCCCCACCCTTCATCATCATCAAACCCATTTCACTGCATTTATTACACTCTCTCTACCCACTAAATCCAAAATCCACCGTTCCAATCCTCCACCCTCCTCCCTCCTTTTCTCTGTCAGAGGCAAAACAACAACATATGGGAAGCGTCACAAATCTCAAATTTACGTCCCTGTCCTTCGTTTCCTCCTCCTTCTGAATCCTTTGGTTACCAGAACTGGATCTGACCCACATTTTCCATCGCTAATGGCTGCAGCGTTGGAGTGTTGGTCCAGCCGTGCCAGTACGGACGAGGAGCTGGTGGAGCAGGTTCTGATGAGGACGCAGGATAGATCCGAGGGCGAAACGACGTCGGAGAGCTCCTCCGCTGGTGGTCCAAAGGAGACGTCGCAGATGCAGAAGAAATTGCAGAGGCTGAGTCGGAATGTTACTGAAGCAATAGCCTCGCTCAAGAACTCTCTCAATCTGGATTCTGCTCGCGACCCACCGCCTTCTTCCAAGATTGATAATTCTCGGAAGGTTGTATGGGGAAGTGTTGTCCGGAATCTCACACAGCTTTATCCTGGTAGCCAGCTGCCGGAGAAGCTCATGTCCAATATTCGCAAGCATTACGATTCGTTGCCTCTCAGCTATGCTCAGGCGGGATTCGATATGAAAGATGTATTTCTTCACATCAAGTTGATGGAGCAAGCATCGGTAGAGGACCAGCCTGCGATTCTGATTCAAGAAGAACCAGATAATGAAATTCAGGGGTCTATATTTAAGCTGACTTTTGCCTGTAACTCTCCAATTTCATGGCCGGCAATGTCCAGTGCACTAGATAGTTCATGCATTTGCTGTAAGAAGATACAGATCTTTGAGAAAAAAGGTTTTACCCTTGGGATTGTTCTTCTTCTTGTTCAGCCTGGGCAAGATAAATTGATTAGAGTCCGAGTTGAAAATGCACTAAAATTTGCTATGAAGAAGCCCAAAACCAGTGCGGTGAAGCTTCCCTTTGGACTTTGTGGATGTCAAGAAGAGAACTCCAAGGGGAGAGAACTTGGAGAGATTGAAGAGGACAGTGGCGATGCATATTATGGAAACGGTTTTGAGAATTCTTGCCAAAAGGTTCAGCTTCAGGTGCCCCTACCTACTTCGTCTTTTCTTGTATCCGTAGACGAATGGCAGACAATTCAGTCAGGTGGGGATGAGATAAAAAAATGGCTATTGAACTCAGATAGTCTTGAGTTTATAGAACAGACTGGACCCAATTCATATAAAGGGGTCTACATGGGTAGAAGGGTTGGAATCGAGAAGCTCAGAGGGTGTGACAAAGGAAACTCTTATGAGTTCGAGCTCCGTCAAGATCTGCTGGAACTGATGACTTGTGGGCATAAAAAGATTCTGCAATTTTGTGGTGTTTCCGTGGATGAGAGTCATGGGTTATGCGTGGTGACGAAGTTCATGGAAGGTGGTTCTGTTCATGACTTGATGCTAAAGAACAAGAAGCTCCTGACAAAGGAAATTGTAAGAATTGCTGTTGATGTAGCTGAGGGGATCAAGTTTCTGAACGATCACGGTGTTGCATACAGGGACCTCAATGCACAGAGGATTCTATTGGATCGCCATGGGAACGCTTGCTTGGGAGATATGGGAATAGTCACTGCTTGCAAGAATGTTGGAGAGGCAATGGAGTATGAAACTGATGGTTATCGGTGGCTGGCTCCAGAGATAATTGCAGGTGATCCAGAGAGTGTGACAGAGACATGGATGAGTAACGTTTATAGTTTTGGGATGGTACTTTGGGAGATGGTTACTGGTGAGGCAGCCTATGCTGCATATTCACCAGTGCAGGCAGCAGTGGGCATAGCTGCATGCGGCCTTAGACCTGAGATCCCAAAGGACTGCCCTCAAAGTCTTAAAACTCTCATGACGAAGTGCTGGAACAACCAACCTTCAAAACGCCCTCAATTCTCTGAAATATTAGCTACACTCTTGCGATCAAACAATACCAATAGGTAA 2154 0.4652 MGDPVERKQQPYRPIKTTWPHISLQNDTPCPPFSHFHPFLSVHRRHHHNSQKPPTLHHHQTHFTAFITLSLPTKSKIHRSNPPPSSLLFSVRGKTTTYGKRHKSQIYVPVLRFLLLLNPLVTRTGSDPHFPSLMAAALECWSSRASTDEELVEQVLMRTQDRSEGETTSESSSAGGPKETSQMQKKLQRLSRNVTEAIASLKNSLNLDSARDPPPSSKIDNSRKVVWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAGFDMKDVFLHIKLMEQASVEDQPAILIQEEPDNEIQGSIFKLTFACNSPISWPAMSSALDSSCICCKKIQIFEKKGFTLGIVLLLVQPGQDKLIRVRVENALKFAMKKPKTSAVKLPFGLCGCQEENSKGRELGEIEEDSGDAYYGNGFENSCQKVQLQVPLPTSSFLVSVDEWQTIQSGGDEIKKWLLNSDSLEFIEQTGPNSYKGVYMGRRVGIEKLRGCDKGNSYEFELRQDLLELMTCGHKKILQFCGVSVDESHGLCVVTKFMEGGSVHDLMLKNKKLLTKEIVRIAVDVAEGIKFLNDHGVAYRDLNAQRILLDRHGNACLGDMGIVTACKNVGEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVLWEMVTGEAAYAAYSPVQAAVGIAACGLRPEIPKDCPQSLKTLMTKCWNNQPSKRPQFSEILATLLRSNNTNR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0087 717 Gene3D Transferase(Phosphotransferase) domain 1 452 715 - -
Dere05g0087 717 Pfam Protein tyrosine and serine/threonine kinase 496 709 IPR001245 GO:0004672|GO:0006468
Dere05g0087 717 ProSiteProfiles Protein kinase domain profile. 459 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0087 717 PRINTS Tyrosine kinase catalytic domain signature 636 658 IPR001245 GO:0004672|GO:0006468
Dere05g0087 717 PRINTS Tyrosine kinase catalytic domain signature 566 584 IPR001245 GO:0004672|GO:0006468
Dere05g0087 717 PRINTS Tyrosine kinase catalytic domain signature 680 702 IPR001245 GO:0004672|GO:0006468
Dere05g0087 717 PRINTS Tyrosine kinase catalytic domain signature 530 543 IPR001245 GO:0004672|GO:0006468
Dere05g0087 717 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 182 709 - -
Dere05g0087 717 MobiDBLite consensus disorder prediction 166 189 - -
Dere05g0087 717 MobiDBLite consensus disorder prediction 158 189 - -
Dere05g0087 717 SUPERFAMILY Protein kinase-like (PK-like) 441 709 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0087 Dere-ChrDere05 1109237 1113065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0087 442 709 MAP Kinase Kinase Kinase AT2G17700 34.545 3.60e-48 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Dere05g0087 PK_Tyr_Ser-Thr 6e-42 CL0016