Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0067 ATGGCCGCGGACGCGACGGCCAAATTCAAAAACACCGAGTTTCGCCCCGTTCCGCAGCCGCCAGACTTCCATCCAGAGATCACCGTGTCAGCCCACGATGGCCTCCGTTTTTGGCAGTTCATGATTGCCGGTTCCATTGCTGGCTGCATTGAGCACATGGCAATGTTTCCCGTCGACACCGTGAAGACCCATATGCAAGCTCTGGGGTCATGCCCGATTAAGTCCGTAACCGTTAGACAAGCCCTTCATTCGATTTTGAAATCGGAGGGTCCATCTGCTCTGTACCGTGGTATCGGCGCGATGGCTCTTGGTGCTGGACCCGCACATGCCGTGTATTTTTCCGTTTATGAGGCGTGTAAGAAATATTTCTCCGGTGGGAATCCCAACAACTCCGCTGCCCATGCGGTTTCAGGTGTATGTGCTACTGTTGCTAGTGATGCTGTGTTCACACCCATGGATATGGTGAAACAAAGATTGCAATTAAGTAATAGTGGTTACAAGGGTGTTTGGGACTGTATAAAGAGGGTGTTGACTGAGGAGGGATTTGGAGCATTTTATGCGTCATATAGGACTACAGTTTTAATGAATGCACCATTTACGGCAGTCCATTTTGCTACATATGAGGCCGCAAAAAGAGGTTTAATGAAGATTTCACCGGATAGTGCTGATGATGAGCGTTTAATTGTCCATGCTACCGCTGGAGCTGCTGCTGGAGCTTTGGCTGCTGTGGTTACCACACCACTTGATGTGGTTAAAACTCAATTGCAGTGTCAGGGCGTCTGTGGATGCGATAGATTTAAAAGTAGTTCAATTGGAGATGTTATCAGAACAATATTGAAAAAAGATGGATACAGAGGGCTCTTTCGAGGATGGACTCCAAGAATGCTCTTCCATGCTCCTGCTGCTGCAATCTGCTGGTCTACATATGAAGCTGGAAAGACCTTTTTCCAAGAATTAAATGAGAGCAAGGACAGGGGCACTGTCATCTAA 990 0.4788 MAADATAKFKNTEFRPVPQPPDFHPEITVSAHDGLRFWQFMIAGSIAGCIEHMAMFPVDTVKTHMQALGSCPIKSVTVRQALHSILKSEGPSALYRGIGAMALGAGPAHAVYFSVYEACKKYFSGGNPNNSAAHAVSGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCIKRVLTEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMKISPDSADDERLIVHATAGAAAGALAAVVTTPLDVVKTQLQCQGVCGCDRFKSSSIGDVIRTILKKDGYRGLFRGWTPRMLFHAPAAAICWSTYEAGKTFFQELNESKDRGTVI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0067 329 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Dere05g0067 329 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Dere05g0067 329 Pfam Mitochondrial carrier protein 226 318 IPR018108 -
Dere05g0067 329 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Dere05g0067 329 PRINTS Mitochondrial carrier protein signature 97 117 IPR002067 GO:0055085
Dere05g0067 329 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Dere05g0067 329 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Dere05g0067 329 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Dere05g0067 329 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Dere05g0067 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Dere05g0067 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Dere05g0067 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Dere05g0067 329 PANTHER MITOFERRIN-1-RELATED 22 318 - -
Dere05g0067 329 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Dere05g0067 329 FunFam Mitochondrial carrier protein, expressed 130 324 - -
Dere05g0067 329 Gene3D Mitochondrial carrier domain 130 328 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0067 Dere-ChrDere05 846963 850786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0067 233 323 Chloroplast and Mitochondria Gene Families AT2G30160 34.066 1.31e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0067 05 846963 850786 Dere05g0067 05 846963 850786 ECH