Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0064 ATGTCCAACATTAATCGAATCCGACATCTGTTAGTTCTGGTTCAGTTTTGGAGAATCCTAGGATTCCTGTCGAGCGTCGTAGGGCTGACATGTTACTCTCTGAGCCCATCTTTCAAGCGTATATTTGGAGAGTGGAACACTCTGAAGATCTTCCTCTACACTGTGATGAGTCTGATCGTCACCTACTTTATTTTGTTTGCGAACAGATGGAGACTTCCCAAGAGTTTACTGTTCAAATCTCATGTGGGGTTCTTGGTCTTGATGCTCACCTCTGTTTACTCCCTTTTCTGTGACCAATTCGGGGCGGAAAAACCAGACACATTGAGCCTGATTTCTAATGTTGCATTTGCTTTGATGTCTTTAAGCTTGTCAATGCAGATTCAACTTGGTTTCGAGGACGATATCCTCAATTTTTGCCTTGGGGTTCTCACTGTACAGCTCTTGAAGACCAGCTTGTTAATCCTCTCTTTGTTCGGAGTACTTTTCTGTTATGTTCTCGTGGTTCTTCGCTCCTATGGACATTTAACTACTACCGTTACCGTCGACGATCACGTGCCAATCAAAATTGATACTTCTGCTAATGATCGCAGAAAACAACTATATCGGATTCTGGGGATTGAGACTGAAAGTGAAGGCCTAGAGACATTCATTTTTCCTTCAGATTTTGAAACAAAACTCAAGGGGGCAATTGCTTCTGGGTTTGTTAAAGAGTGTTACGATGTTTTCATCACTTGGCGAAAGCAGTTCTTAAACGACAAGCTGTTGAATATGGGGTTTCAGAAGCTCAGCATCGAGGAGGTCCGCAAGCTGCCATTAAAATATCTCAAAGACGACATCGAACAGTGGGCGAAAGCTTCCAACGACGTCGTCAAGAGACTGTTTCCTCGCGAACGACATCTCTGCCACGTCATCTTCTCCGGTTTCTCTCCTCTTGACGATCTCTCTTTCATGGAGGTCTGTCGGGGATTAACGACACAGCTACTGAACTACGCCGACGCCGTTTCGACCACAACCCAATCGCCGGAGCGTTTGTTCAGAATCATAGACGTCTTGGAGACAATGGAAGACATTTTACCAAACTTGGAGTCACTATTCTCTAATCAACACTGTGGGTTTCTCTATGATGAGGCCATCACAATCTGCAAAAGGTTAGAGGAAGCAATTGGAGGCGTTTTCATGGAACTCGAGAATCTGATTCGTTATGACCCAGCAAAGGTGGCTGTTACAGGAGGTGGGCTTCACCCGACAAACCGTTATGTGATGAACTACCTTGAAGCTGCCTGTCAGTGTCGGAAGACACTTGAGAGAGTTTTCGAGGAAAACCTAGTTTCATCATTATCATCATCATCGTCATCTTCTTGTTCGCTACCTGAGCAAATGGTTCGGATTGTGGAGTTGCTAGAGAGTAACTTGGAGGCTAACTCCAAGATCTACGAGGACTTTCCTTTGTGCTCTGTTTTCATGATGAACAATGGGAGGTACATAGTTCACAAGGCCAAGAATAGTGAACTCGGGAAGGTATTGGGTGATGAGTGGATGCAGAAACTCGTATCAAAAGTGAGACAATGCCTTGTGAGTTATCAGAGAAGTTCGTGGGACAGGGTGCTTGAATTGCTAGATATTCTGGATAACGAGTCACTTACACCATCACATGCCAAAGAGAAGCATGAGCTGTTTAAGTTGCAGTTCGAGGAGATTTGTGAGAAGCAGTCAACGTGGGTCATCTTTGATGATCAACTAAGAAATGTCATTACAAGTTCATTGAAGAAAATTTTGTTCCTTGCCTACGAAAATTTCACGCTTACGGTCCAACATGATGAGGAAAAAACTGGAGATTTTGGGGTCCAAGATATTGACGCCCTTATAAACAAGTTGTTTCTCGGAGAAGATGAGCACATAAACCCCGACCATATTCCACTAACGTGGACCGTAGTGCTGCCAAGTGCAAAAGATTTTCATGAATGGAGGAAATACGGTGCATACACAGGAACGATCAAGGTTGTGGAGCGAGAAAACACGTCCAACAAATACAAGAAAATCCAAAGATGTACAAGACATGCTACTCTGGCTTCCATACATGCACCCTCCTTCTCAAGGCTCCACAACAATAGAATTCTGGGAGGCTTCTATTGTTTCGAGTTCGCTTCCCGTCGGATACTCCTGTCAGTTCTATTCGTCTCTGTTACTCCACGTTCTCGGGCTTACGGTAAAAAACAACTAGCACCTGCAGCAAGCCGTTTCCTCACTCTGATGGCGTCCAAGTTTGGATTAGCTGGTGGGATTCCCGAGCGACGGGTACGACCCATTTGGGACGCCATTGATTCGCGCCAGTTCAAGAACGCTCTCAAGCATGTTACCACACTTCTCGCTAAGCATCCTAATTCACCTTATGCGCTTGCACTCAAAGCTCTCATTTTGGAAAAAATGGGCAAACCTGAGGAAGCATTCTCTGTTTGCTTGCAAGCCAAGGAGCTTTTGTATACAAACGATTCTCTTTTGATGGATGATCTAACTCTCAGTACACTTCAGATAGTATTTCAGCGATTAGATCGCTTGGATTTGGCTACCAGCTGCTACGACCATGCTTGTGGTAAATTCCCAAATAATCTGGAACTAATGATGGGTCTATTTAACTGCTATGTTCGTGAATACTCATTTGTGAAGCAACAACAGACAGCTATCAAAATGTACAAACTCGTTGGAGAAGAGAGGTTTCTACTTTGGGCAGTCTGTAGCATCCAATTACAGGTATTCTGTGGCAATGGAGGAGAGAAACTATTACTTTTAGCTGAGGGTTTACTTAAGAAGCATGTTGCTTCACATGGCTTGCATGAGCCTGAAGCTCTTATGGTCTACATTTCCATATTGGAACAGCAAGCTAAGTTTGGGGATGCTTTGGAAATTCTCTCTGGGAATCTAGGATCTCTATTGATGATTGAAGTTGATAAGCTACGCATACAGGGTAGACTTCTTGCTCGGGCAGGCGACTATGCTGCTGCTGCTGATATTTTTCAGAAAATTCTAGAGTCTTGCCCAGATGACTGGAAGTATTTCTTTCATTACCTAGGCTGTATACTGGAAGATGACAGCATATGGTGCGATGAGGCTGCTAATGATCCAGTACACCCCCCAAAATTTTTGAGTTGCAAGGTCTCACATTTGACAGATGAAGAGTTTGATAGTCGAATATCAAATGCATCAGCTTTTATACAAAAGTTACAAGTAGACACCATTAATGACTCTGTAAGGGGTCCATCCTTGGCAACTATAGAAGTTGAAAGAAGAAAGCATTTACGTGGGAAGGGGAATGATGACAACTTAATAGATGTCATTGTCCAATACTTTTGCAGGTTTGGTCACTTGGCCTGCTTTGCTAGTGATATTGAGATGTTTATCGAAGACTTCACTCCTGGTAAGAAGATGGAGCTTTTGGAGAAGTTGAGGAGAAATTCTGATGCTTTATCAACCATGCCAACAAAGAAACTTGGGCAATCTATATCCCTTTTCAAAATCCAACAATTATTGATGGGGAACATGTTCAAGTCTTCTGCAAGTGAACTTGAAGTCGGTTGTGTGCAAATGGCTGAAATATATTGCAAAAGCATTCCACTTTCAAAGGACTTGCATCCACAGGAGAGCATGCAGGGTGAAGAGCTGCTTTCAGTGACTTGTAATGTATTGGTTCAGTTATTCTGGCGCACTAAAAATGTTGGCTATTTAGTTGAGGCAATTGTGGTTTTGGAGTTCGGCTTGGCAATACGAAGATATGTTTGGCAATATAAGATCTTGCTGTTGCACTTGTATTCTTATTTTGGTGCTCTTTCAGTGGCATATGAATGGTATAAATCATTGGATGTAAAGAATATTTTGATGGAAACTTTCTCACACCATATATTGCCTCAGATGTTGATATCTCCTCTGTGGACAGAATTAGACAGTCTGCTAAAGGATTATCTCAAGTTTATGGATGACTACTTAAGAGAATCTGCAGATCTAACATTTCTTGCGTATCGCCATAGAAATTACTCAAAAGTAATTGAATTTGTGCAGTTTAAAGAATGGTTGCAACGCTCCAGTCAGTATTTAGTGGCAAGGGTTGAAGCGCCTATTCTACAGCTAAAGCAGAATTCAGATAATATTGAAGAAGAGGAGGGTGTCCTTGAAAGCTTGAAATGCGGAATTCACTTCTTTGAGCTCTCTAATGAGATTGGATCTAAGTCTTTGACCTTCAATGAGGACCTGCAGTCAAGACCATGGTGGACACCAACTTCGGAGAAAAATTATCTTTTAGGACCATTTGAAGGGATTTCTTATTGTCCAAGAGGAATCTTGACAAATGAAAGGGAGACAAGTTGCAAGAGAATCATTGAGAAGAGATCCCTACTTCCTCGTATGATCTATCTCTCTATTCAAAGTGCTTCAGCATCAATCAAGGAGCATGTTGAAGTCAATGGCTCTGTTCCACCTAAAATCTCCTCAGAGCTTAAATTGTTGCTTGAGCGCTATGCTCAATTGCTGGGCTTTTCTCTGAGTGAAGCAATAGACATGGTGATGGATTTTTCAAGTGAAAGGTTTTCTGCGGTTTTTGGCTCCAACTTGATAGACTGGTTGAATTTCACAGTATTCTTAAATGCATGGAGCTTGAGTTCCCATGAACTGGTGCAGCCAGATGAAAATGGATGGAGGCCCCGTACATGGAGTATGTTAGATTCTTTGTTGGAGAAGTATATTTTGGAGAACGTGAGGTGCATGGAGTCTGAGCTCTGCTCTCCTTGGAGTGATGCTCAACTTCTGATACAGTTAGTTACAGAACCTTTAGCGTGGCATGGACTTGTAATCCAGTCTTGTCTGAGATCATGTCTTCCTACGGGTAAAAAGAAGAAGAAAAGTGGATCAGTAGATCAGTCTGGCTCAAGTCTGGCTCATACAATCACAAATTCTGTGCAGCATTTATCTAGTATAATAGAGGAGATTATGAAATGGATAAGCGAATGGAGAAAAATACCTGAGGATAAGAATTTGGAAGACATTATTTCCCCTCTTCGAAATAATGAGCAGAATGATGGGCCTGGACAGTTCTATCGCATTTTAGAATCATATATTTCCTCCACAGATAACACAGAACTTGGTGATCGAATCTCCCCATCACTTGAGTCCTGGAGTCCTGCAGATGTAGCAAGGAAAATGGTGACTGGGAAGCATAAAGTACTGATGGATTTTTGTAAGATCTGTGAATCAAAACTCAAGTCATTACAGTCAATGAAACAGCAGATAGCTCAACTCTGA 5286 0.423 MSNINRIRHLLVLVQFWRILGFLSSVVGLTCYSLSPSFKRIFGEWNTLKIFLYTVMSLIVTYFILFANRWRLPKSLLFKSHVGFLVLMLTSVYSLFCDQFGAEKPDTLSLISNVAFALMSLSLSMQIQLGFEDDILNFCLGVLTVQLLKTSLLILSLFGVLFCYVLVVLRSYGHLTTTVTVDDHVPIKIDTSANDRRKQLYRILGIETESEGLETFIFPSDFETKLKGAIASGFVKECYDVFITWRKQFLNDKLLNMGFQKLSIEEVRKLPLKYLKDDIEQWAKASNDVVKRLFPRERHLCHVIFSGFSPLDDLSFMEVCRGLTTQLLNYADAVSTTTQSPERLFRIIDVLETMEDILPNLESLFSNQHCGFLYDEAITICKRLEEAIGGVFMELENLIRYDPAKVAVTGGGLHPTNRYVMNYLEAACQCRKTLERVFEENLVSSLSSSSSSSCSLPEQMVRIVELLESNLEANSKIYEDFPLCSVFMMNNGRYIVHKAKNSELGKVLGDEWMQKLVSKVRQCLVSYQRSSWDRVLELLDILDNESLTPSHAKEKHELFKLQFEEICEKQSTWVIFDDQLRNVITSSLKKILFLAYENFTLTVQHDEEKTGDFGVQDIDALINKLFLGEDEHINPDHIPLTWTVVLPSAKDFHEWRKYGAYTGTIKVVERENTSNKYKKIQRCTRHATLASIHAPSFSRLHNNRILGGFYCFEFASRRILLSVLFVSVTPRSRAYGKKQLAPAASRFLTLMASKFGLAGGIPERRVRPIWDAIDSRQFKNALKHVTTLLAKHPNSPYALALKALILEKMGKPEEAFSVCLQAKELLYTNDSLLMDDLTLSTLQIVFQRLDRLDLATSCYDHACGKFPNNLELMMGLFNCYVREYSFVKQQQTAIKMYKLVGEERFLLWAVCSIQLQVFCGNGGEKLLLLAEGLLKKHVASHGLHEPEALMVYISILEQQAKFGDALEILSGNLGSLLMIEVDKLRIQGRLLARAGDYAAAADIFQKILESCPDDWKYFFHYLGCILEDDSIWCDEAANDPVHPPKFLSCKVSHLTDEEFDSRISNASAFIQKLQVDTINDSVRGPSLATIEVERRKHLRGKGNDDNLIDVIVQYFCRFGHLACFASDIEMFIEDFTPGKKMELLEKLRRNSDALSTMPTKKLGQSISLFKIQQLLMGNMFKSSASELEVGCVQMAEIYCKSIPLSKDLHPQESMQGEELLSVTCNVLVQLFWRTKNVGYLVEAIVVLEFGLAIRRYVWQYKILLLHLYSYFGALSVAYEWYKSLDVKNILMETFSHHILPQMLISPLWTELDSLLKDYLKFMDDYLRESADLTFLAYRHRNYSKVIEFVQFKEWLQRSSQYLVARVEAPILQLKQNSDNIEEEEGVLESLKCGIHFFELSNEIGSKSLTFNEDLQSRPWWTPTSEKNYLLGPFEGISYCPRGILTNERETSCKRIIEKRSLLPRMIYLSIQSASASIKEHVEVNGSVPPKISSELKLLLERYAQLLGFSLSEAIDMVMDFSSERFSAVFGSNLIDWLNFTVFLNAWSLSSHELVQPDENGWRPRTWSMLDSLLEKYILENVRCMESELCSPWSDAQLLIQLVTEPLAWHGLVIQSCLRSCLPTGKKKKKSGSVDQSGSSLAHTITNSVQHLSSIIEEIMKWISEWRKIPEDKNLEDIISPLRNNEQNDGPGQFYRILESYISSTDNTELGDRISPSLESWSPADVARKMVTGKHKVLMDFCKICESKLKSLQSMKQQIAQL 1761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0064 1761 SMART tpr_5 836 869 IPR019734 GO:0005515
Dere05g0064 1761 SMART tpr_5 796 829 IPR019734 GO:0005515
Dere05g0064 1761 SMART tpr_5 981 1014 IPR019734 GO:0005515
Dere05g0064 1761 Gene3D Exocyst complex component Exo70 207 634 - -
Dere05g0064 1761 ProSiteProfiles TPR repeat profile. 981 1014 IPR019734 GO:0005515
Dere05g0064 1761 FunFam N-alpha-acetyltransferase 25, NatB auxiliary subunit 763 1081 - -
Dere05g0064 1761 Pfam Exo70 exocyst complex subunit 281 604 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dere05g0064 1761 Gene3D - 763 1079 - -
Dere05g0064 1761 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 758 1665 - -
Dere05g0064 1761 Pfam N-acetyltransferase B complex (NatB) non catalytic subunit 1052 1382 IPR019183 -
Dere05g0064 1761 SUPERFAMILY Cullin repeat-like 230 626 IPR016159 -
Dere05g0064 1761 SUPERFAMILY TPR-like 779 1022 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0064 Dere-ChrDere05 821892 837723 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0064 220 628 EXO70 exocyst subunit family AT5G58430 52.029 1.08e-124 404