Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0055 ATGGCGAGGACGCCCGTCCGATTTCCAAATGGCCTAATTTATCCCAAATTATGGAGATTTCTGGGTTTCTTTTCAAGCCTGGTTGGACTTCTCTGTTACGCTCTCAGTTCGTCTTTCAAACACCTATTTGGGGAATGGAACTTTTTGAAGATCATAATTTACGCCGTGGTAAGTTTCTTTATGAGCAGCATGATGTTGTTTGCTAAGAAATGGCAACTTTCTCGGAGTTTTTTGCTGAAAGTTCATTTGGGTTTCCTGATTTTGATGCTCACAACTCTGTACTCCTTTTTCTACGATAAAGCAATCAAAGGAAAACCAGACCTATTGAGCTTGATTTCCTGTGCTGCCTTTGCTGTAATGTCCTTGAGCCTATCAAGGCAGATTGACCTTGGATTCGAAGTGGATCTTCTCAATTTCTTTCTTGGTTGTCTTACCGTTCAATTGATGAAAGTCAATTTGATGCTTGGCTTTGTTGCTACCATTTTCTGCTATTTCCTCATTGTTCTTCGCTCCAATTCGAATCCTCAGGTACAAATTGGTGCTATTAGAGACGAAGACCACGTAGAAGTGCCAATTGACACTGTAAGGGAAGCTGATAATGACATTGGCTACCATTCTGATTATAACATCAACAGTCATCACCACCAGCAAACACAGACATTACGAAGAAGGTTTGAGGATGGGTATAACTGGAAGAAATATGACGAAAAACAAGTGAAAGGAGCAGAAAAGCATACAAGTTACTACAAATGCACGATCCCCAATTGCCCAGTAAGGAAGAGACTTGAGAGGTCTATAGATGGGCAGAATGCTGAGGTGCTTTATAAGGGTACCCATAATCATGGCAAGCACATGTATGCAGTTACAATGAAGAGAATTTCATCATTTGAAACTCTTAATGCAGATCAGCCTTCAAAAATTGTCCCCACTGATGAAATATTGGACATTCACGGCAATGAACAATTGGATTCGGTTGACACACCAGAAAACTCCTCAATATCAATATGA 1008 0.4038 MARTPVRFPNGLIYPKLWRFLGFFSSLVGLLCYALSSSFKHLFGEWNFLKIIIYAVVSFFMSSMMLFAKKWQLSRSFLLKVHLGFLILMLTTLYSFFYDKAIKGKPDLLSLISCAAFAVMSLSLSRQIDLGFEVDLLNFFLGCLTVQLMKVNLMLGFVATIFCYFLIVLRSNSNPQVQIGAIRDEDHVEVPIDTVREADNDIGYHSDYNINSHHHQQTQTLRRRFEDGYNWKKYDEKQVKGAEKHTSYYKCTIPNCPVRKRLERSIDGQNAEVLYKGTHNHGKHMYAVTMKRISSFETLNADQPSKIVPTDEILDIHGNEQLDSVDTPENSSISI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0055 335 SMART WRKY_cls 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0055 335 SUPERFAMILY WRKY DNA-binding domain 223 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0055 335 Gene3D WRKY domain 210 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0055 335 ProSiteProfiles WRKY domain profile. 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0055 335 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 211 287 IPR044810 GO:0003700
Dere05g0055 335 Pfam WRKY DNA -binding domain 226 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0055 Dere-ChrDere05 742492 743499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0055 225 309 WRKY Transcription Factor Family AT2G38470 45.349 5.48e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere05g0055 WRKY 1.6e-18 CL0274