Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0053 ATGAAGTCGTCGAATATTACAGAGAATAATAGCAATAGTAGCAACATATGGCATTGCGAGCCGAAACAGAAGAATGTGCTATCAAGAGGACTCTTCTTCGGCGATAGCCCTTTGAATTATCTGATGCCTGTGCTTCTACTGCAGATCTCATTAGCCAGCGTGCTTTCCACTGTGATACGCATTCTGCTTTCCCCACTTGGTCAGGATAGCTTCATTCCCCACATGCTGGCAGGCATGTTACTGGGACCATCAATCTTGGGAGAACTTGAGCCAATGCAAATAATATTTTTCCCACCTAAGAGTAACTACGTAAGTGGAACATTGGCCTTTTTTGGATGCATGCTGTTCATGTTCTTGGTTGCGGTCAAAATGGATCTAACTACGGTTCTAAGAACAGGAAAAAAGACATGGGCCATTGGCCTCTTGGCTTTCGCGTTGCCACTCGCAGTCAGCACAATATTCGCTTTCATTCTAAGGACGATGATCACCATGGATCAAAAGCTCAATAACTCCCTCTTTTACATAGCATTCTTCCTATCAAGTAGTTCTTTCCATGTCATTGCTTGCCAATTAGCAGACTTAAAGCTCCTAAATTCAGAACTTGGTCGATTAGCAGTCACTTCATCGATGATCAGTGGAATGATTTCTTGGGTCTGGGTGATTACTTTATTCACAGTGAGACAAAATGATATCACTAGTTATCACCAACCTGTGGTTTGGATGCTCCTGTGTTTGCTAGCTTTGGTGGCTATTATAATTTTCATACTTCGCCCCATCATGCTTTGGATGATTCGTCGAACACCCGAAGGGAAGCCAATCAAACAGAGCTATATACACGTGGTGTTTCTTATGGTATTGGGTTGTGCACTATGTGGGGAGGTTATGGGGCAGCATTTCTTGGTTGGGCCTATTGTTCTGGGCCTGGCTGTACCAGATGGGCCCCCACTTGGAACAGCATTGGTTGAGAAGCTTGATCCCTTAGTGTCAACCATTATGTTGCCATTGTACTTTCTGTACAGTGGAGCCAAGGTCAAGTTCTCTATGATACAAGTTAGTGCCTTTGTGGTTGTGGAGTTGTTGGCTTTGTGCAGCTTCCTTGGGAAGCTTATTGGTTCCATGTTGCCTTCACTGTACTGCAACATGCCACTGGAGGATGCTTTCTCCTTAGGTCTCATCATGAGTGCTAAAGGCATCACTGATATCATCTACATACAGACTGCTAAACACGTCTTTAGAGCTCTTATTCTTTCATTAATCGATGAAGAATCCTATAGCATCATGGTGATAACTACGGTTCTGTTCACCGGAGCCACCACTCCCGTAGTGAAATTCCTGTACGACCCATCAAAGCAATACTTATCGTCCTTGAACAAAAAGAGGACCATCGAACACGCCCCCCCCAACGACGAACTCCGCATTATGGCCTGCATTCACAGCGAACACAGCGCTCCCGCTATCATCCACCTTCTAGAAATGTCCAATCCCACTCTCCAAAACCCCATCTGCTTCTACCTTCTCCACCTCATTCAGCTCACTGCAAGATCTTCTCCTCTTCTCATAGACCACCGTCGCCCATGGAAGAAAAGCCCCATGCACTCCTCACACTCCCAGCACGTCATCAACGCCTTCCGTTTATACGAACACCACATGGCCGGAAAAGTCTCCATCAATCCCTTCACCTCCATCTCGCCTTATGAAACGATGCACGACGACGTTTGCATGCTAGCTGCCGTGAAGAGAACTTCCTTGCTCATCATGCCCTTTCACCAACAATGGACACTGAACGGGGTTGTGGAATCGTCAAGCTCCGTTAGGGCTGTGAACCGTCACGTTCTGAGAACGGCACCTTGTTCGGTTGGGATTCTGGTCGAACGCGGGAGGTTGAGCGGGAAGAACCTGTCGGGAAACGTGACGTTTTATAGCGTTGGGATGATATTTGTGGAAGGGGCGGATGATCGTGAGGCCTTGGCTTATACAATGAGAATGGCTGATCATAGCAATGTGAGCGTGACGGTGATAAGACTGGTGGAGCCTAGGAGGAACAACTACAAGAGCCGGATATTGAAGAGTAGGGGGGATCATGATGGTGATATGATTCACAAGTTCAAGATAGAGTATTTGCAGATAAAACGACATGATTATAGAGAGGAAATGGTGGTGGATAGTGTGGGGATGGTCAATGTAATAAGGTCGTTGGAGGGTTGTTTTGATTTGATATTGGTGGGTAGACAACATTCAAGTGATTCGCCGTTGTTCATGGGGACGTCGTCGGAGTTGAATGAGTATCCAGAACTAGGGTTTCTGGGAGACATGTTGGTGTCTTCGGACTCTAAATTTGAATCGTCTGTTTTGGTGGTGCAGCAGCAGAGGCTGGGAGGGGATAATGATTTACCTCTACTTTGTCCTATGAAATGTTTGAGCGATGAACCCTTTGCGATTGTGGAAGTGCCCCGTGACATGTTCAAGTTATGA 2472 0.4624 MKSSNITENNSNSSNIWHCEPKQKNVLSRGLFFGDSPLNYLMPVLLLQISLASVLSTVIRILLSPLGQDSFIPHMLAGMLLGPSILGELEPMQIIFFPPKSNYVSGTLAFFGCMLFMFLVAVKMDLTTVLRTGKKTWAIGLLAFALPLAVSTIFAFILRTMITMDQKLNNSLFYIAFFLSSSSFHVIACQLADLKLLNSELGRLAVTSSMISGMISWVWVITLFTVRQNDITSYHQPVVWMLLCLLALVAIIIFILRPIMLWMIRRTPEGKPIKQSYIHVVFLMVLGCALCGEVMGQHFLVGPIVLGLAVPDGPPLGTALVEKLDPLVSTIMLPLYFLYSGAKVKFSMIQVSAFVVVELLALCSFLGKLIGSMLPSLYCNMPLEDAFSLGLIMSAKGITDIIYIQTAKHVFRALILSLIDEESYSIMVITTVLFTGATTPVVKFLYDPSKQYLSSLNKKRTIEHAPPNDELRIMACIHSEHSAPAIIHLLEMSNPTLQNPICFYLLHLIQLTARSSPLLIDHRRPWKKSPMHSSHSQHVINAFRLYEHHMAGKVSINPFTSISPYETMHDDVCMLAAVKRTSLLIMPFHQQWTLNGVVESSSSVRAVNRHVLRTAPCSVGILVERGRLSGKNLSGNVTFYSVGMIFVEGADDREALAYTMRMADHSNVSVTVIRLVEPRRNNYKSRILKSRGDHDGDMIHKFKIEYLQIKRHDYREEMVVDSVGMVNVIRSLEGCFDLILVGRQHSSDSPLFMGTSSELNEYPELGFLGDMLVSSDSKFESSVLVVQQQRLGGDNDLPLLCPMKCLSDEPFAIVEVPRDMFKL 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0053 823 PANTHER CATION/H + ANTIPORTER 21 790 - -
Dere05g0053 823 Gene3D - 44 453 IPR038770 -
Dere05g0053 823 Pfam Sodium/hydrogen exchanger family 54 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0053 Dere-ChrDere05 710349 714171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0053 26 788 Antiporter Super Family AT2G13620 36.015 1.40e-168 507