Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0051 ATGGAAGGCGAAAATGAGGGTATATCAGCAGCTGGAAGTAGAACAGTGAGAGAACCCAGAGTTGTGGTCCAGACACCCAGTGAGATAGATATTCTAGACGATGGCTACAGATGGAGGAAATACGGGCAGAAAGTAGTCAAGGGCAATCCAAATCCAAGGAGTTATTACAAGTGTACATACGCAGGATGTCCTGTGAGAAAGCACATAGAGAGAGCCTCACATGACCTCAAGGCAGTGATCACTACCTATGAGGGAAAGCATAACCATGACGTGCCTGCAGCTCGAGGCAGTGGAAGCCATTCTGTGAATAGACCTTTGCCAAACAACATTAACACAGTTACTTCTATTAGGCCCTACACTAACATTAATCCCATTCACAATTCTCGTCTTGAGAGTTATGGACCACCAGAAACAGAAGAACAATCACCTTTTGCGCTAGAGATGTTGCAGAACCCAGCGAGTTTTGGATTCTCCTCAGGGTTCGGGAATTTAATGGGGTCTTACCTGAATCAGCAACTACTAAATGACGCTGTGTTATCTTCCAGAGCCAAGGAGGAGCCCAGAGATAATGACATGTTTCTTGAATCTTTACCATACTGA 600 0.45 MEGENEGISAAGSRTVREPRVVVQTPSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTYAGCPVRKHIERASHDLKAVITTYEGKHNHDVPAARGSGSHSVNRPLPNNINTVTSIRPYTNINPIHNSRLESYGPPETEEQSPFALEMLQNPASFGFSSGFGNLMGSYLNQQLLNDAVLSSRAKEEPRDNDMFLESLPY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0051 199 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 120 IPR044810 GO:0003700
Dere05g0051 199 ProSiteProfiles WRKY domain profile. 27 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0051 199 Gene3D WRKY domain 19 85 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0051 199 SMART WRKY_cls 32 91 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0051 199 Pfam WRKY DNA -binding domain 33 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0051 199 FunFam WRKY transcription factor 33 19 85 - -
Dere05g0051 199 SUPERFAMILY WRKY DNA-binding domain 24 92 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0051 Dere-ChrDere05 694378 695268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0051 33 92 WRKY Transcription Factor Family AT2G38470 58.065 4.67e-18 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere05g0051 WRKY 1.3e-25 CL0274