Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0043 ATGCCTTCAACTGCTCTTCAATGGCTGAGCCTTGTGGGCATCATTTGGCTCCAAGCCGTAAATGGCACAAACACCAATTTTCCTGATTACTCCTCCCAGTTGAAGCAGCTCCTTTCCATATCCCAATTGCAGCTGAATAACTTGGCTTTTGCCTCTGATGCTGGGAAACTTTTTGGCTGGTTTGCTGGTGTGGCTGTTGTCTACCTTCCCCTTTGGCTTGTCCTTGTGATTGGTTCAACTCTTGGGTTAATAGGTTATGGTGTTCAATATCTGTTCGTAACAAATCATATTTCCTCTCTTTCCTATTGGCATGTCTTCTTTCTAACTGTTCTGGCAGGGAATAGTATTTGTTGGATTAACACTGTCTGCTATGTTGTCACGATAAGGAACTTCCCATCTGATCGCCAAGTTGCTGTGGGGTTATCAACTAGTTACCAAGGATTAAGTGCAAAGATTTATACAGATATTGTTGAAGCTGTTTCTCCACACAAAAAGGCTAGAAGCTTTCTTTTCCTGAATGCCATCCTTCCTCTGATAGTTAGCCTAATAGTAGCTCCTGTAGTTAGAGAAATAAAAGTCCCAAGGTCTACACACATGGATGTCGGATTTGTTGCAATGTTTGTTATTACAATTGTGACCGGAATATATGCTGTGATGACCAGCTTGCAATTTGTGTCAGGGAAATTATCTCCATTGAGTAGCCTGATTGGCATTCTAGTGACCCTTTTGCTCCCTTTATTGGTTCCAATTGCAGGGAAGATCAAGGAATTAGTGCGATCGTGGCAAACAAAAAGAGAAAGGCTAAGAGTCTATCATTTCACTGTGGAAGAGAACACTAATGAAGAGAGGACAGAGGATGAGGTTAAAGAGGAAGATAGCGGAGAAGTTAATGATGTTGGTGTAAGAGAAGAAATTGGAGTGAAGTTGATGCTAAGAAGACTAGATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGTCACAATTGGTTTAGTATTTCTGAATAACTTGGGACAAATAGCAGAATCCAGGGGTTGCTCTGGCACTTCATCTTTGGTTTCTTTGTCTTCATCTTTTGGTTTCTTTGGCCGTCTCCTGCCATCTCTCATAGACTACTTCTACAGGGGTAAGTGTACAATTTCAAGACCAGCTTCCATGGTGGCATTGACAGCTCCAACAGCAGGAGCATACTTTTTACTTCTGAATCGAACAGACCTTGCCCTCTACATCAGCACAGCCATAATTGGAGTGTGCACTGGGGCCATTACTTCCATTGCTGTGTCCACAACCACTGAGCTGTTTGGCACCAAGAATTTCTCTGTGAACCATAATGTGGTTGTGGCCAACATCCCCTTTGGCTCCTTTCTGTTTGGCATATCAGCAGCCCTTCTATATCGTAAAGAAGGGGATGGAGATGGGAAATGCATTGGCATGGAATGCTACAGAACCACTTTCATCACCTGGGGGTCCCTCTGTTTCTTTGGGACTTTCTTGGCTTTGATTCTATATGCAAGAACTCGCAAATTTTACTCACTGAAACAATAG 1545 0.4239 MPSTALQWLSLVGIIWLQAVNGTNTNFPDYSSQLKQLLSISQLQLNNLAFASDAGKLFGWFAGVAVVYLPLWLVLVIGSTLGLIGYGVQYLFVTNHISSLSYWHVFFLTVLAGNSICWINTVCYVVTIRNFPSDRQVAVGLSTSYQGLSAKIYTDIVEAVSPHKKARSFLFLNAILPLIVSLIVAPVVREIKVPRSTHMDVGFVAMFVITIVTGIYAVMTSLQFVSGKLSPLSSLIGILVTLLLPLLVPIAGKIKELVRSWQTKRERLRVYHFTVEENTNEERTEDEVKEEDSGEVNDVGVREEIGVKLMLRRLDFWLYFFVYFFGVTIGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLLPSLIDYFYRGKCTISRPASMVALTAPTAGAYFLLLNRTDLALYISTAIIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPFGSFLFGISAALLYRKEGDGDGKCIGMECYRTTFITWGSLCFFGTFLALILYARTRKFYSLKQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0043 514 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 511 - -
Dere05g0043 514 CDD MFS_Mch1p_like 6 496 - -
Dere05g0043 514 Pfam Nodulin-like 7 250 IPR010658 -
Dere05g0043 514 SUPERFAMILY MFS general substrate transporter 6 508 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0043 Dere-ChrDere05 628091 629899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0043 1 513 Nodulin-like Gene Family AT2G30300 50.476 5.51e-158 457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1945 04 22238250 22240154 Dere05g0043 05 628091 629899 CCT
Dere05g0043 05 628091 629899 Dere05g0043 05 628091 629899 ECH