Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0035 ATGGAGAATAAACCAAATATCTTAATGCAAAGATATGAATTAGGAAGGTTACTAGGCCAAGGTACCTTTGCAAAGGTATACTATGCACGGAGTACAATAACAAACCAGAGTGTGGCTATTAAAGTGATAAACAAAGATAAAATTTTGAAATCTGGACAAGCTGATCAGGTCAAGCGCGAAATATCTATCATGAGACTTGTTAGACATCCCAATATTATACAGCTTTACGAGGTTATGGCCACCAAGAGTAAGATTTATTTTGTTATTGAATATGCTAAAGGTGGTGAGCTCTTCAACAAGGTGGCCAAAGGAAAACTAAAAGAAGATGTTGCTCATAAATATTTTCAGCAGCTAGTGAATGCTATAGATTTTTGTCATAGTAGAGGTGTTTACCACCGTGATATAAAGCCAGAGAACCTTTTGTTGGATGACAATGGGAACCTAAAGGTCTCTGATTTCGGGCTGAGTGCTCTAGCTGAATCCAAGAGGCAGGATGGCTTACTGCATACACCTTGTGGCACGCCTGCCTATGTTGCCCCTGAACTCATCAAAAGGAAAGGTTATGATGGTGCCAAAGCTGACACTTGGTCTTGTGGAGTAGTTCTGTTTGTCTTATTGGCAGGTTATCAACCTTTTCATGATTCAAATTTGATTATGATGTACAGGAAGATTACCAGAGCAGACTTTAAATTCCCTAATTGGTTCTCCTCAGAAGTACGTAGAATATTAATCAAGATATTGGATCCAGATCCTGATACTAGGATTTCCATAGCTAAGATTAAGGAATCTTCTTGGTTTATGAAAGGGCCAGTTGCTAGACATAGAAAACCTGAATTGGAAAACAAGACTGTCTCTACTTCAGGTACTAAGCCTTCTGATCAAATTGATGAAAGTGAGGGCATAGCAGGAGAAGCAAAGCAAGAGTCAGTTGTGCCCACAAGGATAAATGCTTTTGATATCATCTCCCTTTCTCCGGGTTTTGATCTATCTGGATTCTTTGAAGACAGATTTAAGAAGAGAGAAGCAAGATTTTCATCAAGGGCACCTGCCTCTACCATCATCTTCAAACTGGAAGAAATTGCTAAGCATCTGAGGCTGAAAATAAAGAAAAGAGAAGCAGGTTTGTTGAAATTAGAGGGCCTCAAGGAAGGTAGGAAGGGGATTTTATCCATTGATGCAGAGATCTTTGAGGTTACTCCATTTTTTCATTTGGTTGAGATGAAAAAATCTAATGGAGATACATTGGAATATCAGAACATATTGAAAGAGGATATTAGGCCTGCTCTTAAGGATATTGTTTGGGTTTGGCAAGGGGACCAGCAAACGCAATCACAACCGTCAGAGGACCAGCTACTGATACATGACCAGCAGTAA 1374 0.3937 MENKPNILMQRYELGRLLGQGTFAKVYYARSTITNQSVAIKVINKDKILKSGQADQVKREISIMRLVRHPNIIQLYEVMATKSKIYFVIEYAKGGELFNKVAKGKLKEDVAHKYFQQLVNAIDFCHSRGVYHRDIKPENLLLDDNGNLKVSDFGLSALAESKRQDGLLHTPCGTPAYVAPELIKRKGYDGAKADTWSCGVVLFVLLAGYQPFHDSNLIMMYRKITRADFKFPNWFSSEVRRILIKILDPDPDTRISIAKIKESSWFMKGPVARHRKPELENKTVSTSGTKPSDQIDESEGIAGEAKQESVVPTRINAFDIISLSPGFDLSGFFEDRFKKREARFSSRAPASTIIFKLEEIAKHLRLKIKKREAGLLKLEGLKEGRKGILSIDAEIFEVTPFFHLVEMKKSNGDTLEYQNILKEDIRPALKDIVWVWQGDQQTQSQPSEDQLLIHDQQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0035 457 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0035 457 MobiDBLite consensus disorder prediction 277 306 - -
Dere05g0035 457 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Dere05g0035 457 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Dere05g0035 457 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Dere05g0035 457 SUPERFAMILY Protein kinase-like (PK-like) 8 287 IPR011009 -
Dere05g0035 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Dere05g0035 457 Gene3D Kinase associated domain 1, KA1 315 435 - -
Dere05g0035 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 430 - -
Dere05g0035 457 CDD CIPK_C 316 430 - -
Dere05g0035 457 Pfam NAF domain 312 370 IPR004041 GO:0007165
Dere05g0035 457 Gene3D Transferase(Phosphotransferase) domain 1 4 314 - -
Dere05g0035 457 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0035 457 FunFam Non-specific serine/threonine protein kinase 2 292 - -
Dere05g0035 457 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0035 457 FunFam Non-specific serine/threonine protein kinase 310 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0035 Dere-ChrDere05 467360 468733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0035 1 440 CBL-interacting serine-threonine protein kinases AT5G58380 68.142 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere05g0035 Pkinase 3.2e-75 CL0016