Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0029 ATGTATGCCAAGAAAGAGAACAAGGAGGATGGTAAAGCAGAGCATCGTTACGTGGAGACCGACCCAACTGGTCGCTATGGTCGGTTTGGAGAAATGCTTGGAAAAGGAGCAACGAAGACAGTGTACAAAGCAATTGATGAGGTTCTTGGAATAGAGGTAGCATGGAACCAGGTCAAACTCAATGTGGCACTTTGCACACCATACGATTTGCAGCGACTTTACTCAGAGGTTCATCTCCTCAGTACTCTCAAGCATGAGTGCATTATACGATTCTATACCTCTTGGATTGATGTTGATCACAAGACCTTCAACTTCATTACGGAAATGTTCACTTCAGGGACACTCAGAGAATACAGGAAGAAATACAAGCAAGTTAGCATACAAGCAATAAAGAGCTGGTCTCGTCAAATCTTACAAGGTCTTGTTTATCTGCATGGCCATGACCCTCCAGTAATTCACAGGGACCTCAAATGTGATAACATATTTGTCAACGGCCATCTTGGGCAAGTTAAGATTGGTGATCTGGGACTAGCAGCAATTCTCCATGATTCCCACTCAGCCCACAGTGTTATTGGCACCCCAGAGTTCATGGCACCAGAATTGTATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACGTCTGAATATCCTTATAGTGAATGTGCTAACCCTGCACAGATCTACAAGAAAGTGACCTCGGGAAAGCTACCTGCAGCCTTTTTCCGGATTGAAGATGTAGAAGCACAAAAATTCATTGGAAAATGCCTAGTAACTGCAGCAAAGAGACCATCAGCAAATGAATTGTTGTTTGACTCATTTCTTGTGTCTGATGATGCATTCTCAACTACAAAATTTGGAATTCAGAAGCCATTTTTGAATGACAGTAGGATGGAAAAACTGCAACTGAATGATGATTTACCCAGGACTCAAATGACAATCAGAGGGAAACTGAATCCTGGCGATGGTACTATCTTTCTCAAAGTACAAATTGCTGAAAACGCAGGTTATGTAAGGAACGTATATTTTCCCTATGACATTTTCACTGACACCTCCATTGATGTTGCAATGGAGATGGTGAAAGAGTTGGAGTTAACTGATTGGGAGCCATTTGAAATTGCAAATATGATTGAAGAGGAGATATCTGCTCTGCTGCCAAGTAGAAGGAAAAGGGATTGCTCTGATGCATGTCATTTGTATAGTAATCAAGATGACTATGATGATGGATTTCATCCTCATTTCCACTCGTTGTCTTCTTGTTCATCATCCCAAGAATCAATATCAGGCTTAGTTGCAAAAGCTGAGGAAATGACAAATGGATATTACTGGCCCCATGATGATTTGCTTGATGATGCCAGTTCGCGATGCTCTTCTCAAGGGACATATTCCAACTTTAATTATTTTTCTGTAGATGACCAGTTGTACAATCTGGCTTCAACTAGAAAAGATAAGCATCTTATCACCCGGAGTCACAAGTGTACAAGGTTTGCCCGAGATGAAGACCTAAGCACCAGGTTGTCTATGTCTAGAAATTGTTGCAACAAGTGTAAAATTTTAGCAGGACCACAGGCAGCTTGTACTAGAAATAAGATGACAATGGACAATCAAAGATTAACAAGAAACAGGTCACTAATTGATGTTGGTAGCCAGTTACTAAACCGATCTCTGATCAAAGAGTTAAATAACAGACGGCTATTCAAGACAGTTGGTGCCGTGGAAAATATTGGGTTTCAAACACCTTGTGAGGTTTCCCAAAAGAAGGAGCCGGAATGTGGTGAAGTAGATCTGAAGCCTTCAAGGAGTGGCAAAGGATGA 1845 0.4114 MYAKKENKEDGKAEHRYVETDPTGRYGRFGEMLGKGATKTVYKAIDEVLGIEVAWNQVKLNVALCTPYDLQRLYSEVHLLSTLKHECIIRFYTSWIDVDHKTFNFITEMFTSGTLREYRKKYKQVSIQAIKSWSRQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHDSHSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPAAFFRIEDVEAQKFIGKCLVTAAKRPSANELLFDSFLVSDDAFSTTKFGIQKPFLNDSRMEKLQLNDDLPRTQMTIRGKLNPGDGTIFLKVQIAENAGYVRNVYFPYDIFTDTSIDVAMEMVKELELTDWEPFEIANMIEEEISALLPSRRKRDCSDACHLYSNQDDYDDGFHPHFHSLSSCSSSQESISGLVAKAEEMTNGYYWPHDDLLDDASSRCSSQGTYSNFNYFSVDDQLYNLASTRKDKHLITRSHKCTRFARDEDLSTRLSMSRNCCNKCKILAGPQAACTRNKMTMDNQRLTRNRSLIDVGSQLLNRSLIKELNNRRLFKTVGAVENIGFQTPCEVSQKKEPECGEVDLKPSRSGKG 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0029 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Dere05g0029 614 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0029 614 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Dere05g0029 614 SUPERFAMILY Protein kinase-like (PK-like) 23 318 IPR011009 -
Dere05g0029 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 489 - -
Dere05g0029 614 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0029 614 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Dere05g0029 614 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Dere05g0029 614 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0029 614 CDD STKc_WNK 25 285 - -
Dere05g0029 614 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0029 Dere-ChrDere05 375440 380156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0029 17 596 MAP Kinase Kinase Kinase AT5G58350 58.904 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere05g0029 Pkinase 2.3e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1972 04 22494613 22499293 Dere05g0029 05 375440 380156 CCT