Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0018 ATGCACTCATTTGAGAACACCAATCCCTCTGCTCTCTTCATTCCATTTCACGATCTCTTTTCTCACGCATCTTCTTATCGATTGAACCTATCTCGCCAGTCTACCATGGCAGATGAAACACAAAATGATATGAAAGAAGAGGTTCCTGAAATTGCCCCTTTTGATCCTACTAAAAAGAAGAAGAAGAAGAAAATTACAATTATAGATCCTGCTGATGATTCGGTGGACAACTTGGCTGAGAAGACAGAAAGCCTGTCAGTTTCAGATGGGCTTGAGACTACGTTTTCTGGATTAAAAAAGAAGAAGAAGAAGCCGGTTGAAACCAGTAACTTGACTGATGAGGGTGGAGATGCTGGCGACGATTTGGATGATCACTCTGGAGAGGATGAAGGAGAAGGTGATAACTTGAGGCATCGATATCCTTGGGAAGGAAGTGACCGTGATTATGAATATGAGGAGCTTCTGGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTGGCTGGAGATAGGCGAAGGACAGTTATGAGGCCTCCACAAGTTCTTCGTGAGGGCACAAAGAAAACTGTCTTTGTGAATTTTATGGATTTATGCAAAACGATGCATCGACAGCCTGACCACGTCATGGCATTTTTGCTTGCTGAGCTGGGTACAAGTGGCTCACTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTCCTCCAAAGAACTTTGAAGGAATTTTGCGGCGATATATCAACGAATATGTCATTTGCCTTGGATGCAAGAGTCCAGACACAATACTTTCAAAGGAGAACCGTCTGTTCTTTCTCCGTTGTGAGAAGTGTGGATCTGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAACGCAGGGACGTGA 912 0.4408 MHSFENTNPSALFIPFHDLFSHASSYRLNLSRQSTMADETQNDMKEEVPEIAPFDPTKKKKKKKITIIDPADDSVDNLAEKTESLSVSDGLETTFSGLKKKKKKPVETSNLTDEGGDAGDDLDDHSGEDEGEGDNLRHRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFPPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0018 303 Gene3D - 146 288 - -
Dere05g0018 303 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 152 302 IPR045196 GO:0003743|GO:0006413
Dere05g0018 303 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 148 255 IPR016189 GO:0003743|GO:0006413
Dere05g0018 303 SMART eIF2Bneu4 173 282 IPR002735 GO:0003743|GO:0006413
Dere05g0018 303 MobiDBLite consensus disorder prediction 114 129 - -
Dere05g0018 303 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 252 287 IPR016190 GO:0003743|GO:0006413
Dere05g0018 303 Pfam Domain found in IF2B/IF5 172 281 IPR002735 GO:0003743|GO:0006413
Dere05g0018 303 FunFam Eukaryotic translation initiation factor 2 subunit 146 288 - -
Dere05g0018 303 MobiDBLite consensus disorder prediction 96 142 - -
Dere05g0018 303 MobiDBLite consensus disorder prediction 96 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0018 Dere-ChrDere05 263527 268614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0018 36 299 Eukaryotic Initiation Factors Gene Family AT5G20920 77.154 3.88e-139 392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0018 05 263527 268614 Dere05g0018 05 263527 268614 ECH