Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0010 ATGGCTGGGATTGATGGTAATAATTTTCCCCTAAATAGCGACTGGGGTCCTCCTAGTCCGAGTCCAAGAACCTTTTTCTCTAGAATGCTATGTGAAGATAATGTCAAAAGACCAATCTCAGAGCCTCCTGGAAGTGCTACAACTGAGGTGCCCTTTCTGGGAACTCAAGAGCTCATTATGACCGGAAAATTCAACATAAAAGATACGGCAAAAGATTATGCTTCTGGTGCCCAATTAACTGACACAACTTCTTTGTCTGAGAATAAGTCTAGCTCACGGGGAGGCCTTGTCGAAAGGATGGCTGCTAGAGCTGGATTTAATGCTCCAAGATTAAATACAGAAAGCATTAAATCAGCTGACCTTACACTTAATTCTGACACTCGATCTCCTTACTTGACCATACCACCTGGCCTCAGTCCAACTACACTTTTAGATTCTCCAGTGTTCCTTTCAAATTCACTGGCACATCCATCTCCAACAACTGGAAAGTTTTCATTTATCTCAAATGGTATTTTCCAGTGCGCAGAACCAAACTCTGGTGCTCCTGAGAAAACAAAAGACGACGACTTTGATGATATATATACATCATCGTTTGCCTTCAAGAGTGCAACAGCTTTGGGCTCCTTCTATCATGGTGCTGCTAATAAAATGAATCCAACCACACTGCCTGAACAATATCTTACTGGTACTGAGGTCTCAGCTCCATCAAAGAATTCTTTTCAATCTCAGCATGTAGATGCAGTCAATGTTCAAACTGTGAATAAAAGTGGCCTCCATCTTCGGGAAGAGTTGATTGACTCACCCACTCAAAATGAAATTAGAACAGCGCTTGAGGATCAAGCAGATGAAGAGGGAGATCAAAGAGGAAACGGAGACTCACTGGCTGCTGGTGTTGGTAGCACACCATCTGAAGACGGATATAACTGGAGAAAATACGGACAAAAACAAGTTAAAGGTAGTGAGTATCCTCGAAGTTACTATAAATGTACACATCCAAATTGTCAGGTTAAGAAGAAAGTGGAGCGATCTCATGAGGGCCACATAACAGAAATCATCTACAAGGGGAATCACAACCATTCAAAACCTCCGCCAAATCGCAGATCAGCAATAGGGTCTGTGAACCCTCTTAGTGACATGCAAGCGGACATGTCTGAAAGTGTTGAACCGCAGGGTGGGGGTGATGGTGAACTTGGCTGGGCAAGCGCTCAAAAAGGAAATATAGCTAGAGCTGCTGATTGGAAGCATGAGAACATTGAAGTAACCTCATCAGCAGCATCTTTAGGCCCCGAATTCTGCAACCTGTCCACCAATTTGCAGAGTCAGAATGGTACTCATTTTGAATCGGGAGATGCAGTGGATGCCTCCTCTACTTTCTCTAATGATGAGGATGAGGATGATAGGGGCACTCATGGCAGTGTATCGTTAGGTTATGATGGAGAAGGAGATGAATCGGAGTCTAAAAGAAGAAAACTGGAATCTTATACAAACACAACAGATTTGAGTGGAGCCACTAGAGCTATCCGTGAGCCTAGAGTTGTTGTCCAGACTACCAGCGAAGTAGATATCCTTGATGATGGATATCGTTGGCGCAAGTATGGACAAAAAGTTGTAAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGTACCAATGCAGGCTGCACTGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTAAAATCCGTGATCACTACATATGAAGGAAAGCACAATCACGATGTTCCTGTTGCTCGCAATAGCAATCAAGTCAATGCTGCCACTTCTACCATTGTTCCTGCCCAAGCTTCCAGTGTTATTCACAGTCAGACTCACAGAGCTGAAGCATCACAAGTTCACAGCAGCATTGGAAGGCTTGAGAGGCCTGCGCTGGGCCTCAGCTCATTCAACCTACCTGGAACTGGGCCGGGGCCTGGGCCTGGGAGGCCACAGCAGCAGCAACTAGGGCCTCCCCATGCCTTGTCCTTTGGAATTGGAATGAATCAATCAGGCTATCCCAATCTAGCCGCCGTGGCAGCACTGGGCTCTACCCATGCAAAGCTTCCTGTCATGCCTGTTCATCCATTCTTGCCGCATCAACGTCCGCCAAATGAAATGGGCTTCGTGTTGCCTAAAGGAGAACCCAATTTGGAGCCTATTCCAGGCCGTGGTCTTAATCTGCCAACTGGTTCGTCAGTCTATCAAGAAATTATGAGTCGTATGCCGCTTGGACCTCATATGTGA 2244 0.4545 MAGIDGNNFPLNSDWGPPSPSPRTFFSRMLCEDNVKRPISEPPGSATTEVPFLGTQELIMTGKFNIKDTAKDYASGAQLTDTTSLSENKSSSRGGLVERMAARAGFNAPRLNTESIKSADLTLNSDTRSPYLTIPPGLSPTTLLDSPVFLSNSLAHPSPTTGKFSFISNGIFQCAEPNSGAPEKTKDDDFDDIYTSSFAFKSATALGSFYHGAANKMNPTTLPEQYLTGTEVSAPSKNSFQSQHVDAVNVQTVNKSGLHLREELIDSPTQNEIRTALEDQADEEGDQRGNGDSLAAGVGSTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGNHNHSKPPPNRRSAIGSVNPLSDMQADMSESVEPQGGGDGELGWASAQKGNIARAADWKHENIEVTSSAASLGPEFCNLSTNLQSQNGTHFESGDAVDASSTFSNDEDEDDRGTHGSVSLGYDGEGDESESKRRKLESYTNTTDLSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPVARNSNQVNAATSTIVPAQASSVIHSQTHRAEASQVHSSIGRLERPALGLSSFNLPGTGPGPGPGRPQQQQLGPPHALSFGIGMNQSGYPNLAAVAALGSTHAKLPVMPVHPFLPHQRPPNEMGFVLPKGEPNLEPIPGRGLNLPTGSSVYQEIMSRMPLGPHM 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0010 747 MobiDBLite consensus disorder prediction 480 494 - -
Dere05g0010 747 MobiDBLite consensus disorder prediction 77 93 - -
Dere05g0010 747 MobiDBLite consensus disorder prediction 353 373 - -
Dere05g0010 747 Pfam WRKY DNA -binding domain 304 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 Pfam WRKY DNA -binding domain 524 580 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 FunFam WRKY transcription factor 294 363 - -
Dere05g0010 747 MobiDBLite consensus disorder prediction 632 658 - -
Dere05g0010 747 SMART WRKY_cls 303 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 SMART WRKY_cls 523 582 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 MobiDBLite consensus disorder prediction 77 96 - -
Dere05g0010 747 SUPERFAMILY WRKY DNA-binding domain 515 583 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 Gene3D WRKY domain 293 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 MobiDBLite consensus disorder prediction 1 21 - -
Dere05g0010 747 SUPERFAMILY WRKY DNA-binding domain 300 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 MobiDBLite consensus disorder prediction 442 496 - -
Dere05g0010 747 ProSiteProfiles WRKY domain profile. 518 583 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 144 608 IPR044810 GO:0003700
Dere05g0010 747 FunFam WRKY transcription factor 33 510 576 - -
Dere05g0010 747 Gene3D WRKY domain 510 576 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 MobiDBLite consensus disorder prediction 278 311 - -
Dere05g0010 747 ProSiteProfiles WRKY domain profile. 304 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0010 747 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0010 Dere-ChrDere05 153778 157274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0010 1 742 WRKY Transcription Factor Family AT5G56270 47.341 1.23e-179 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere05g0010 WRKY 3.8e-24 CL0274