Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2846 ATGAAAATACAGGGCCTGAAAATGGGGAAGGCAGGAGGAGGCTCTTGGTTGAAGGCTGTGAAAAGGGCCTTCACGTCTCCGACCAAAGAAAAGGACAAGAGAAGCAGCAGGAGGAGAGAAGAACGTGAACAAGAGGAGGAGGAGAAGAAGAGGGGTGAACGAAGATGGATCTTCAGAAAGCCCTTTAGCCAAGAAACAATTACCCTGCATTGTGAAGAAAGAACCATAACAACTATAGCTGACGTGACAGCAACAAGTTGTGAGGCAATCGAGGAGGCAGAACAAAGACATGCAATTGCAGTAGCCATGGCAACCATAGCTGCAGCAGCAACTGCTCAAACAGCTGTGGAGGTCGTTCGCCTTGCTAAGCCTTCCTTCTTTGTCAGAGAACACAATGCGGCCATTGTTATCCAAACAGCATTCAGAGGCTATCTGCGAGCCAAGCGGCTTTCACAGAACGAAAGAAACACCGATTCCAGAGATGATAGTGGGACAGAGGAATTGAAGAAGCACTGGGATGACCACCCACAAACAGTAGATAATATTCGAGCTGTTCTACAGAGAACAAAAGAAGTTGCCTTGAAACGCGAAAAGTCCCTGTCTGATGCCTTCTCTCATCAGATATGGAGAACTAGTAGAGAAACCAGTGCCAGAGAGGGAGAGGATGAAGACAGAGACAGCCCCATATGGAGGAGAAGGGTGGCTGGGAACAAATATCAATATCTCGGAACCTTCAGTACCCAAGAGGAAGCAGCTGATAAAGTTCTGGTTAAAAGTAGCTTGGAAGATGTAATTACAGCCATAGACCTCTCTAAAAAGACCATGTCTCGTATTCGTCTCAACTATATCTGGGCTCTTAGTTACAACATTCTTGGGATGCCAATTCCGGCGGGCATCTTGAACCCCTTCACTGGAATTAGGTTGCCCACTGGCTTGCTGGTGATTGCATAG 951 0.4711 MKIQGLKMGKAGGGSWLKAVKRAFTSPTKEKDKRSSRRREEREQEEEEKKRGERRWIFRKPFSQETITLHCEERTITTIADVTATSCEAIEEAEQRHAIAVAMATIAAAATAQTAVEVVRLAKPSFFVREHNAAIVIQTAFRGYLRAKRLSQNERNTDSRDDSGTEELKKHWDDHPQTVDNIRAVLQRTKEVALKREKSLSDAFSHQIWRTSRETSAREGEDEDRDSPIWRRRVAGNKYQYLGTFSTQEEAADKVLVKSSLEDVITAIDLSKKTMSRIRLNYIWALSYNILGMPIPAGILNPFTGIRLPTGLLVIA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2846 316 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 249 309 - -
Dere04g2846 316 ProSiteProfiles IQ motif profile. 130 159 IPR000048 GO:0005515
Dere04g2846 316 Gene3D - 243 289 IPR023214 -
Dere04g2846 316 MobiDBLite consensus disorder prediction 17 52 - -
Dere04g2846 316 SUPERFAMILY HAD-like 250 304 IPR036412 -
Dere04g2846 316 MobiDBLite consensus disorder prediction 24 52 - -
Dere04g2846 316 MobiDBLite consensus disorder prediction 151 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2846 Dere-ChrDere04 40106832 40108566 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2846 250 309 Primary Pumps ATPases AT1G63440 73.333 1.95e-22 96.3