Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2841 ATGTTGCAGTCGACCACACCGCCATCCCCAGCGGCTCCAACCAAGATACAGGCGTGCAACGTCTTGACCGTCGCATCTCTAGTAGCCCTCTGCTCCTCCGCCATCCCCAGCGGCTTCAACCAAGACACCGGCGTGCAACGTCTTCACCGTCGCATCCCTGGTAGCCCTCTGCTTCTTCGCCGCCGACTTCGTCCTTTTCCTCTCCATCCTCACTTCGCGGTTCCAAGTGAAGGACCTTGCTGCACCTTAGTGTCGAGCATCTCTGTTCGGAGCATGAAAATACAGGGCCTGAAAATGTTAGCTTGCCATGCTGCAAGAGAAAATTTCGCATCCATTGATAGAGATTTCGGTGTAGTACGTATTTTTTTTTCTTTCATGGGGAAGGCAGGAGGAGGCTCTTGGTTGAAGGCTGTGAAAAGGGCCTTCAGGTCTCCGACCAAAGAAAAGGACAAGAGAAGCAGCAGGAGGAGAGAAGAACATGAACAAGAGCAGGAGGAGAAGAAGAGGGGTGAACGAAGATGGATCTTCAGAAAGCCCTTTAGCCAAGAAACAATTACCCAGCATTGTGAAGAAAGAACCATAACAACTATAGCTGACGTGACAGCAACAAGTTGTGAGGCAATTGAGGAGGCAGAACAAAGACATGCAATTGCAGTAGCCATGGCAACCATAGCTGCAGTAGCAACTGCTCAAGCAGCTGTGGAGGTCGTTCGCCTTGCTAAGCCTTCCTTCTTTGTCAGAGAACACAATGCGGCCATTGTTATCCAAACAGCATTCAGAGGCTATCTGGTAAGGAGAGCTCTTGGGGCACTTAAAGGATTAGTGAAGCTGCAAGCATTAGTAAGAGGTCATAATGTACGAAAACAAGCTAAACTAACACTTGCGTGCATGCAAGCTCTTGTTCGAGTTCAAACTCGAGTATGCCAAGAGCGAGCCAAGCGGCTTTCAAAGTACGAAAGAAACACCGATTCCAGAGATGATAGTGGGACAGAAGAAGTGAAGAAGCACTGGGATGACCACCCACAAACAGTAGATAATATTCGAGCTGTTCTACAGAGAACAAAAGAAGTTGCCTTGAAACGCGAAAAGTCCCTGGCTGATGCCTTCTCTCATCAGATATGGAGAACTAGTAGAGAAACCAGTGCCAGCGAGGGAGAGGATGAAAAAAGAGACAGCCCCATATGGAGGAGAAGGTATAGGGAGAACAGAGGTAGAGCTTCGTGTGATCGAAGAGACCCCATCAAAATAGATGAAATTGGCACATATAGACCCCACTCTAACCCTGTTCACACAGATCAAGAGAGATCATATAGTGGGTATAAACCCCACTTCAATAAACCACCGAGGCTTTCTTTGTCATCGCCTGGGCATCATAAAGCCCACTACGATATCTCAGTGGCACTGACACCATCAACGAAGATGAAGCATTTTGAGGTACGATCAGCTAGTCCTCCTTGTGCAAAGTCCAACCTCTTAATGCCAAACTATATGGCAGCCATTGCATCTGCTAAGGCTCGGTTTCGCTCACAAAGTGCACCCACACACATGGATTCAACCCCAGAAAAGGAAAAGCTGCGGATTCTCAAGAGGAGGTTCCATGGTGGCTGGGAACAAATATCTATATCTCGGAACCTTCAGTACCAAGAGGAAGCAGCTGATAAAGTTCTGGTTAAAAGTAGCTTGGAAGATGTAATTACAGCCATAGACCTCTCTAGAAAGACCATGTCTCGTATTCGTCTCAACTATATCTGGGCTCTTAGTTACAACATTCTTGGGATGCCAATTGCTGCGGGCATCTTGAACCCCTTCATTGGAATTAGGTTGCCCACTGGCTTGCTGGTGATTGCATAG 1851 0.477 MLQSTTPPSPAAPTKIQACNVLTVASLVALCSSAIPSGFNQDTGVQRLHRRIPGSPLLLRRRLRPFPLHPHFAVPSEGPCCTLVSSISVRSMKIQGLKMLACHAARENFASIDRDFGVVRIFFSFMGKAGGGSWLKAVKRAFRSPTKEKDKRSSRRREEHEQEQEEKKRGERRWIFRKPFSQETITQHCEERTITTIADVTATSCEAIEEAEQRHAIAVAMATIAAVATAQAAVEVVRLAKPSFFVREHNAAIVIQTAFRGYLVRRALGALKGLVKLQALVRGHNVRKQAKLTLACMQALVRVQTRVCQERAKRLSKYERNTDSRDDSGTEEVKKHWDDHPQTVDNIRAVLQRTKEVALKREKSLADAFSHQIWRTSRETSASEGEDEKRDSPIWRRRYRENRGRASCDRRDPIKIDEIGTYRPHSNPVHTDQERSYSGYKPHFNKPPRLSLSSPGHHKAHYDISVALTPSTKMKHFEVRSASPPCAKSNLLMPNYMAAIASAKARFRSQSAPTHMDSTPEKEKLRILKRRFHGGWEQISISRNLQYQEEAADKVLVKSSLEDVITAIDLSRKTMSRIRLNYIWALSYNILGMPIAAGILNPFIGIRLPTGLLVIA 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2841 616 SMART iq_5 247 269 IPR000048 GO:0005515
Dere04g2841 616 SMART iq_5 270 291 IPR000048 GO:0005515
Dere04g2841 616 PANTHER IQ-DOMAIN 5-RELATED 126 523 - -
Dere04g2841 616 Pfam Protein of unknown function (DUF4005) 481 530 IPR025064 -
Dere04g2841 616 Gene3D - 538 589 IPR023214 -
Dere04g2841 616 ProSiteProfiles IQ motif profile. 272 299 IPR000048 GO:0005515
Dere04g2841 616 Pfam IQ calmodulin-binding motif 249 267 IPR000048 GO:0005515
Dere04g2841 616 Pfam IQ calmodulin-binding motif 275 291 IPR000048 GO:0005515
Dere04g2841 616 SUPERFAMILY HAD-like 549 604 IPR036412 -
Dere04g2841 616 MobiDBLite consensus disorder prediction 419 442 - -
Dere04g2841 616 MobiDBLite consensus disorder prediction 145 170 - -
Dere04g2841 616 ProSiteProfiles IQ motif profile. 248 276 IPR000048 GO:0005515
Dere04g2841 616 Gene3D - 246 316 - -
Dere04g2841 616 MobiDBLite consensus disorder prediction 315 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2841 Dere-ChrDere04 39964990 39966991 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2841 134 532 IQD Protein Family AT4G00820 36.211 1.54e-63 217