Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2835 ATGAATTCCATGGAAAATGATGATACCACCTATTCAAATATTACAGCACATCCAAGCAGGAGGAGGCTCTTGGTTGAAGGCTGTGAAAAGGGCCTTCAGGTCTCCGACCAAAGAAAAGGACAAGAGAAGCAGCAGGAGGAGAAGAAGAGGGGTGAACGAAGATGGATCTTCAGAAAGCCCTTTAGCCAAGAAACAATTACCCAGCATTGTGAAGAAAGAACCATAACAACTATAGCTGACGTGACAGCAACAAGTTGTGAGGCAATTGAGGAGGCAGAACAAAGACATGCAATTGCAGTAGCCATGGCAACCATAGCTGCAGTAGCAACTGCTCAAGCAGCTGTGGAGGTCGTTCGCCTTGCTAAGCCTTCCTTCTTTGTCAGAGAACACAATGCGGCCATTGTTATCCAAACAGCATTCAGAGGCTATCTGGTAAGGAGAGCTCTTGGGGCACTTAAAGGATTAGTGAAGCTGCAAGCATTAGTAAGAGCGAGCCAAGCGGCTTTCAAAGTACGAAGAAACACCGATTCCAGAGATGATAGTGGGACAGAAGAAGTGAAGAAGCACTGGGATGACCACCCACAAACAGTAGATAATATTCGAGCTGTTCTACAGAGAACAAAAGAAGTTACCTTGAAACGCGAAAAGTCCCTGGCTGATGCCTTCTCTCATCAGATATGGAGAACTAGTAGAGAAACCAGTGCCAGCGAGGGAGAGGATGAAAACAGAGACAGCCCCATATGGAGGAGAAGGTATAGGGAGAACAGAGGTAGAGCTTCGTGTGATCGAAGAGACCCCATCAAAATAGATGAAATTGGCACATATAGACCCCACTCTAACCCTGTTCACACAGATCAAGAGAGATCATATAGCGGGTATAAACCCCACTTCAATAAACCACCGAGGCTTTCTTTGTCATCGCCTGGGCATCATAAAGCCCACTACGATATCTCAGTGGCACTGACACCATCAACGAAGATGAAGCATTTTGAGGTACGATCAGCTAGTCCTCCTTGTGCAAAGTCCAACCTCTTAATGCCAAACTATATGGCAGCCATTGCATCTGCTAAGGCTCGGTTTCGCTCACAAAGTGCACCCACACACATGGATTCAACCCCAGAAAAGGAAAAGCTGCGGATTCTCAAGAGGAGGTTCCACTAA 1161 0.4643 MNSMENDDTTYSNITAHPSRRRLLVEGCEKGLQVSDQRKGQEKQQEEKKRGERRWIFRKPFSQETITQHCEERTITTIADVTATSCEAIEEAEQRHAIAVAMATIAAVATAQAAVEVVRLAKPSFFVREHNAAIVIQTAFRGYLVRRALGALKGLVKLQALVRASQAAFKVRRNTDSRDDSGTEEVKKHWDDHPQTVDNIRAVLQRTKEVTLKREKSLADAFSHQIWRTSRETSASEGEDENRDSPIWRRRYRENRGRASCDRRDPIKIDEIGTYRPHSNPVHTDQERSYSGYKPHFNKPPRLSLSSPGHHKAHYDISVALTPSTKMKHFEVRSASPPCAKSNLLMPNYMAAIASAKARFRSQSAPTHMDSTPEKEKLRILKRRFH 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2835 386 Pfam Protein of unknown function (DUF4005) 333 381 IPR025064 -
Dere04g2835 386 PANTHER IQ-DOMAIN 5-RELATED 49 371 - -
Dere04g2835 386 SMART iq_5 128 150 IPR000048 GO:0005515
Dere04g2835 386 Pfam IQ calmodulin-binding motif 130 148 IPR000048 GO:0005515
Dere04g2835 386 MobiDBLite consensus disorder prediction 32 53 - -
Dere04g2835 386 MobiDBLite consensus disorder prediction 269 295 - -
Dere04g2835 386 Gene3D - 127 178 - -
Dere04g2835 386 ProSiteProfiles IQ motif profile. 129 157 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2835 Dere-ChrDere04 39842350 39843681 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2835 53 385 IQD Protein Family AT4G00820 29.817 3.26e-36 136