Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2819 ATGAACGTAGAGACTAGAACGGATGAACCCAGAGACCAGTTTCCTGTAGGAATGCGTGTGCTTGCTGTTGACGATGATCCAACATGTCTCATGGTGTTGGAAACTCTGCTTCGGAGATGTCAATATCACGGTGTGCATCCTTTTTCCCTTTTCTGTGAGATTGAAAATTTGGGTTATAGATATGTGCTTTGTTCTTTGGATTTTGAGGTTCAGTTGGCTTTTCTATCAAGAATCTTAACGACGACTAATCAGGCAATAATAGCTTTGGAGATGTTGAGAGAGAACAAAAACAAGTTTGACCTGGTTATTAGTGATGTTCATATGCCAGACATGGATGGATTTAAGCTGCTTGAGCTTGTCGTGTTGTCTGCATATGGTGACACAAAGCTGGTGATGAAGGGGGTTACTCATGGTGCATGTGACTACCTTCTGAAACCTGTTCGAATTGAGGAGCTACAGAACATTTGGCAGCATGTTATAAGGAGGAAGAAGTTTGACTCAAAGGAGAAAAACAACACCTGCAGCCAAGATAAGCCTCATTCTGGTACCAACAACGGATTAGCTTCAGCAGGAGCTGGAAATTCTGATCAATATGGAAAGCTTACCAGAAAAAGGAAGGATCAGGATGACGAAGATGATGATGAGTATGAGCATGGTCATGACAATGACGACCCTTCAACCCAAAAGAAGCCTCGTATTCTTTGGTCAGCTGAGCTGCACCGAAAGTTTGTTGCTGCTGTTAATGAATTAGGCGTTGACAGTATGTTCCTCAATCTTCAACAAAATATTTTTTTCCCCCTTATTTCCGTTTATCAAGCTTGTTATGAACAATTTTATGCTAATGAATATAAGTCTGGTTCTCATAAATATAGGCAGTATCTGAAAAGAATTAGCTGTGAGGCAAATCAGCGGGCTAATATGGTGACAGCCTTAGGAAGTGCAGATTCATCATATCTGAGAGTGGGATCTCTGAGTGGTTCTGGACAGTTTCAGAACAATGTTTTCCAATCCCTTCCATATAGTGGGATGATTGGAAGTTTGAACACTCCTTCTGGTCTTGGTGTTCATGGGTTGCCTTCATCAGGAATTCTTCAGTTGGGTCATACACAGAATTTAAACAACTCCATGAATGATCCTCCTAAGTTCCAGCCATCCATAGCTTATGTAAATCAGAATGGCGGTTCACTCCAGGGCATGCCAGTGTCTGTAGGGCTTGGTCAATCACAACCCAATATGGTTATTAGTTCTGTTCAATGTCCTACTACTGGTTTTGATGATGTAACAATATCTCTCATCTCAAATAAATTGGCAGATCCAAGAGCAAGAGGAAGCTCTAGTTGCTCAAGAACTTCACTTCTTGGTGTCACAAACAATGGTTTGATGTTAGAACCAAATTTTCAAGACACACAAAGGGGAAGAGGATATGAGAATCTTGCTTCAGTAGCCTCACGACATTCAGAATTTTCTTTGCCTTTGCTGGATAATCAGAATGGTAAGAGTAGTGATCATTGGCCAAGTCTCATGCAGTCATCTGGGATGCACCCAAACTCTTACTCAACAAATGAATGTTTTCATATTGGGAATCCAAGTGGTGCTTCGTCCATTTTTACTAATAATACAGCGAATATGGCATATCAAGGGTGGGATGGGCATTCGTTACACTCTTTGATTCCTGTAAATGGTGCAGTTGGTCCCTCAAACTTCCACAGAAACTTGGACTGTGATTATGTAAACCCCTTAGAAACGATGCATGAGGGGGTCCCAAAATCAGCTGAAGATACCTCATTGAAACCCAATCAAGGAAATATCGTGGACCCCCATAAGGCACAACGGAATCGCGTCTCTAATGATCTGGGTACATTGGAAGACTTAGTCCGTGCAATGATGACACAGGAGCAAGATAAGGTGCAATCGGTGGATGGAGACTTCATATGTGATAATTTCACGAGTGAAACATCTATGTGA 1965 0.4163 MNVETRTDEPRDQFPVGMRVLAVDDDPTCLMVLETLLRRCQYHGVHPFSLFCEIENLGYRYVLCSLDFEVQLAFLSRILTTTNQAIIALEMLRENKNKFDLVISDVHMPDMDGFKLLELVVLSAYGDTKLVMKGVTHGACDYLLKPVRIEELQNIWQHVIRRKKFDSKEKNNTCSQDKPHSGTNNGLASAGAGNSDQYGKLTRKRKDQDDEDDDEYEHGHDNDDPSTQKKPRILWSAELHRKFVAAVNELGVDSMFLNLQQNIFFPLISVYQACYEQFYANEYKSGSHKYRQYLKRISCEANQRANMVTALGSADSSYLRVGSLSGSGQFQNNVFQSLPYSGMIGSLNTPSGLGVHGLPSSGILQLGHTQNLNNSMNDPPKFQPSIAYVNQNGGSLQGMPVSVGLGQSQPNMVISSVQCPTTGFDDVTISLISNKLADPRARGSSSCSRTSLLGVTNNGLMLEPNFQDTQRGRGYENLASVASRHSEFSLPLLDNQNGKSSDHWPSLMQSSGMHPNSYSTNECFHIGNPSGASSIFTNNTANMAYQGWDGHSLHSLIPVNGAVGPSNFHRNLDCDYVNPLETMHEGVPKSAEDTSLKPNQGNIVDPHKAQRNRVSNDLGTLEDLVRAMMTQEQDKVQSVDGDFICDNFTSETSM 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2819 654 ProSiteProfiles Response regulatory domain profile. 19 160 IPR001789 GO:0000160
Dere04g2819 654 SUPERFAMILY CheY-like 77 165 IPR011006 -
Dere04g2819 654 MobiDBLite consensus disorder prediction 176 196 - -
Dere04g2819 654 CDD REC_typeB_ARR-like 20 160 - -
Dere04g2819 654 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 272 IPR045279 GO:0009736
Dere04g2819 654 Gene3D - 18 209 - -
Dere04g2819 654 Gene3D - 226 298 - -
Dere04g2819 654 SMART REC_2 18 156 IPR001789 GO:0000160
Dere04g2819 654 MobiDBLite consensus disorder prediction 167 229 - -
Dere04g2819 654 Pfam Response regulator receiver domain 82 154 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2819 Dere-ChrDere04 39113612 39117468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2819 1 650 Response Regulator Gene Family AT2G25180 37.318 9.60e-89 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere04g2819 Response_reg 2.4e-09 CL0304