Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2818 ATGGGCGTTGGCCGTGAAGTCTCTATCTCACTTGATAGCGTGAGGGACAAGAACCTAATGCAGCTCAAGAAGCTCAATATAGCTCTTTTCCCCGTTCGTTACAATGACAAATACTATGCTGATGCCCTTGATTCTGGCGAATTTACTAAACTAGCTTACTATAGTGACATATGTGTTGGGGCAATTGCATGCCGGCTAGAGAAGAAGGATGGTGGGGCAGTCCGGGTTTACATCATGACTTTAGGTGTATTAGCACCTTATCGTGGACTTGGTATCGGAACAAGGCTGTTGAATCATGTTCTTAATCTTTGTTCCAAGCAAAACATTTCGGAGGTTTACTTGCATGTGCAGACTAACAATGATGATGCCATAAACTTTTATAAGAAATTCGGTTTTGAAATCACAGAAACAATTCAGAACTACTATACAAACATCACACCACCAGACTGCTATGTTCTCACCAAGCAAATCGCTCCAAGCTCATCGAAGAAATAA 495 0.4162 MGVGREVSISLDSVRDKNLMQLKKLNIALFPVRYNDKYYADALDSGEFTKLAYYSDICVGAIACRLEKKDGGAVRVYIMTLGVLAPYRGLGIGTRLLNHVLNLCSKQNISEVYLHVQTNNDDAINFYKKFGFEITETIQNYYTNITPPDCYVLTKQIAPSSSKK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2818 164 CDD NAT_SF 51 115 - -
Dere04g2818 164 PANTHER N-ALPHA-ACETYLTRANSFERASE 6 162 - -
Dere04g2818 164 FunFam Putative n-alpha-acetyltransferase 50 6 158 - -
Dere04g2818 164 Gene3D - 5 158 - -
Dere04g2818 164 Pfam Acetyltransferase (GNAT) family 44 132 IPR000182 GO:0016747
Dere04g2818 164 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 156 IPR016181 -
Dere04g2818 164 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 158 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2818 Dere-ChrDere04 39097911 39101295 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere04g2818 Acetyltransf_1 9.3e-16 CL0257