Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2801 ATGCCTACCCAACTAGGAGTGCTTACTGCCCTTGATGTGTCCAAGACACAGTGGTACCACTTCACCGCCATTGTTATTGCCGGTATGGGCTTCTTCACCGACGCCTACGATCTCTTCAGCATAGCCAACGTCACCAAGTTGCTCGGACGAATCTACTACACCCACGAAGGCGCGCCGAATCCCGGAACCCTACCGCCGAACGTCTCCTCCGCTGTCAACAGCGTCGCCCTCTGCGGCACCCTAGTCGGACAGCTTTTCTTCGGCTGGCTAGGCGACAAAATGGGCAGAAAAAAAGTCTACGGTATAACCCTTGCTCTCATGGTCGTCTCCTCTCTCGCCTCCGGCCTCTCCTTCGGCAAATCCGCCAAGGGCATCATCGCCACGCTCTGTTTCTTCCGCTTCTGGCTCGGGTTCGGCATCGGCGGCGACTACCCTCTCTCTGCCACCATCATGGCGGAGTACGCCAACAAGAAGACACGTGGCGCGTTTATCGCCGCGGTTTTCGCCATGCAGGGTTTCGGAATTCTGGCAGGCGGGATCGTTTCGCTCGTCGTCTCGGCGGCGTTCGACCGCGCTTACAAGGCTCCGGCGTACAACGTCGACGCCGCGGCGTCCCTTGTTCCTGAAGCAGACTACGTGTGGCGAATAATTCTGATGTTTGGGGCTGTACCTGCAGGCCTCACGTACTACTGGAGAATGAAGATGCCTGAGACGGCTCGTTACACAGCGCTTGTGGCTAAGAATGCGAAGCAAGCAGCACAAGACATGGCCAAAGTGCTGCAAGTTGAGATTGAAGCAGAACAGGAGACTGTAGATAGAATCACTGTGCAGGAGAACAACAGCTTCGGATTGTTCAGTAAGAAGTTTGCTCGCAGGCATGGGCTTCACTTGGTTGGAACGACGACCACTTGGTTTCTGTTAGATATTGCGTATTACAGTTCGAATCTCTTTCAGAAAGACATTTATACTGAAGTGGGATGGCTTCCTCCTGCAGCAAAAATGAACGCAATCGATGAGGTTTACAGGGTTGCGAGAGCACAAACACTCATAGCACTATGCGGCACCGTGCCGGGTTACTGGTTCACGGTGGCGCTGATAGACTACGTCGGTCGCTTCTTCATCCAGCTAATGGGCTTCTTCTTCATGACTGTCTTCATGTTCGCTCTCGCAATCCCATACAAGTACAACCACTGGACCAAGCCGCAACACCGAACAGGGTTTCTCGTCATGTACTCCCTCACCTTCTTCTTCGCTAACTTCGGTCCCAACGCCACCACCTTCGTCGTCCCCGCTGAGATTTTCCCGGCGAGGCTGCGCTCCACTTGCCACGGCATATCAGCGGCGGCCGGGAAGGCTGGGGCGATCGTCGGCGCGTTCGGGTTTCTGTACGCTGCGCAGAGCAAGGACCCGACGAAGACTGAAACAGGGTACCCTACTGGCATTGGGATGAAGAATTCGCTGATCATGCTTGGTGTGATTAACTTCGCAGGGATGCTGTTTACGTTTCTTGTGCCTGAACCGAAAGGAAAATCCTTGGAGGAGCTAAGTGGAGAGAACGAGGAACAAGGAGGTGATTTGGCTATGGACCACCATGCCTCCTCAAATAGGACTGCTCCAGTACTTCGATATTGA 1632 0.5429 MPTQLGVLTALDVSKTQWYHFTAIVIAGMGFFTDAYDLFSIANVTKLLGRIYYTHEGAPNPGTLPPNVSSAVNSVALCGTLVGQLFFGWLGDKMGRKKVYGITLALMVVSSLASGLSFGKSAKGIIATLCFFRFWLGFGIGGDYPLSATIMAEYANKKTRGAFIAAVFAMQGFGILAGGIVSLVVSAAFDRAYKAPAYNVDAAASLVPEADYVWRIILMFGAVPAGLTYYWRMKMPETARYTALVAKNAKQAAQDMAKVLQVEIEAEQETVDRITVQENNSFGLFSKKFARRHGLHLVGTTTTWFLLDIAYYSSNLFQKDIYTEVGWLPPAAKMNAIDEVYRVARAQTLIALCGTVPGYWFTVALIDYVGRFFIQLMGFFFMTVFMFALAIPYKYNHWTKPQHRTGFLVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTETGYPTGIGMKNSLIMLGVINFAGMLFTFLVPEPKGKSLEELSGENEEQGGDLAMDHHASSNRTAPVLRY 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2801 543 Coils Coil 250 270 - -
Dere04g2801 543 FunFam Inorganic phosphate transporter 1-6 19 528 - -
Dere04g2801 543 NCBIfam phosphate:H+ symporter 11 518 IPR004738 GO:0005315|GO:0006817|GO:0016020
Dere04g2801 543 Pfam Sugar (and other) transporter 24 515 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere04g2801 543 SUPERFAMILY MFS general substrate transporter 12 516 IPR036259 -
Dere04g2801 543 MobiDBLite consensus disorder prediction 513 543 - -
Dere04g2801 543 MobiDBLite consensus disorder prediction 513 527 - -
Dere04g2801 543 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 509 IPR020846 GO:0022857
Dere04g2801 543 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 507 - -
Dere04g2801 543 Gene3D MFS general substrate transporter like domains 270 533 IPR036259 -
Dere04g2801 543 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
Dere04g2801 543 CDD MFS_PhT 24 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2801 Dere-ChrDere04 38742886 38745359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2801 7 540 Inorganic Solute Cotransporters AT2G32830 76.350 0.0 841