Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2781 ATGAAATTGCTGAGTTTCTTTAGGCAAGTGAGGGATGAAACTGAGCTGCTTTTGCTCTCTGTGCGCTTCTCTTTGTTTGGTATTTTCTCAATCATATTAGCTTCGATTCAACAATTAATCAATTCAGTTTGCAGTTTAGGTGTTGTGTTCCCAAAGGTCTGCATGGCTGGGATTGATGATAATGTTGCCCCAACTGCTGATTGGGGTCTTCCGGTTCCAAGTCCAAGAACCATTTTCTCTAGAATGTTTGATGAAGATAATGTCACACTACCAATCTCAGAGACTCCTGGGAGTGCTATAACTGAAGTGCTCTTTCAGGGAACTCAGGATCCCAATTCAGCAGGAATATCCAACGTAAAAGATAGACTACAAGATGGTACTTCTGATGGCCAATTGAGTGACCGAAGTTCCTTGTCTGAGCAAAAGTCAAGCTCACAGAGAGGTCTGGTTGAAAGAATGGCTGCTAGAGCTGGCTTTAATGCTCCGAGATTGAATACAGAAAGCATTAGACCAGCTGACCTTTCGCATAATTCTGACATTCGATCTCCTTACTTGACCATACCTCCTGGTCTCAGTCCCACTACACTTTTAGATTCTCCAATGTTCCTTTCAAATTCACTGGCACAGCCATCTCCAACGACAGGAAAGTTTCCGTTTATCTCAAATGGCAGCAACCGGTGCTCAGAATTGTCCACTGATGCTCCTGAGAAAAGTAAAGATAACAGCTATGATGATATCTATGCATCATCATTTGCTTTTAAGCCTGCAACAGATTTGGGCTCTGCATTCTATCAGGGTGCTGCAAGAAAAATGAATACAACTATACTTCCTCATCAATCCCTTGCTGGAATTGAGGTCTCGGTTCAGTCAGAAAACTATTTTCAATCTCAAGGAGTTGATTCTGTCAAAGATAAAAATGAGAATAAAATTGGCCTCCATCTTCAGCCAGGCTTTATTGACTTGCCTATGCAAAAAGATAATGCATCTAATTTTGTCTCGACTGATCAAAGGGCTTTTGATAATGTTGGTGGCAGCACTGAACATTCTACCCCACTTGAGCTGCAAGAAGATGAAGATGAAGATCAAGGGGGTAATGGAGACTCAATGATTTCTGGTGTTGGTGGCGCACCATCTGAAGATGGATATAACTGGAGGAAATATGGCCAAAAACAAGTCAAAGGTAGTGAGTACCCCCGAAGTTACTACAAGTGCACACATCCAAATTGTCAGGTTAAGAAGAAAGTAGAGCGATCTCACGAGGGCCATATCACAGAGATCATCTACAAGGGAGTTCACAACCATTCCAAACCTCCTCCAAATCGCCGATCAGCTGTAGGATCAGTTAATTCGCTTGTTGACATTTCAGAGCGTGTTGAACCTGAGAGTGATAATAATGGGGACCTGCACCAGACAAGTGCACAAAAGGTAAATGTAACTGGGGCTGCTGAATGTAAGCTTGATAACCGTGAAGTGACATCAGCATCTGCAGCTCCTGAATATTGCAACCAGTCTACTAATTTGCAGACTCAGAATGGTACTGACTTTGAATCAGGAGATGCAGTGGACATGTCATCTACATTTTCTAATGATGAAGGTGAAGATAATCAAGGCACTCATGGCAGTGTATCGTTGGGTTACGATGGTGAGGGAGATGAATCAGAGTCTAAAAGAAGGAAACTTGAATCTTATTCAGCGGAGTTAAGTGGAGCCACTAGAGCTATTCGTGAGCCTAGAGTTGTTGTTCAGACGACCAGCGAAGTAGATATCCTTGATGATGGGTATCGATGGCGGAAATATGGGCAAAAAGTTGTTAAAGGAAATCCTAACCCAAGGAGTTACTACAAGTGTACCAATGCAGGCTGCACTGTGAGGAAGCATGTAGAGAGAGCATCACATGATGTAAAATCTGTGATCACTACATATGAAGGAAAGCATAACCACGATGTTCCCGCAGCTCGCTCTAGCAGTCATGTCAATGCTGCTGCTGCTGCTGCTTCTAGCACAGTTGCTGTACAAGCTTCCACAGGTATCCAAACCCATCATGTTCATAATCATAGATCTGAAACATCCCAACTTCAAATTGGAGGTGGTATTGGAAGCCTTGAGAGGCCTGCTGCTCTGCCTTTGGGCTCATTCAACTTACCTGGGAGGCCACAGTTAGTGCCTTCTCATGGCTTCTCCTTCGGCATGTCAAACGTCGGGATACCGGGATTTGGTCCTCCTGCCCAACCAAAGCTTCCATTCATGTCTGTTCATCCATTCTTGGCGCAACAACGTGCGCCGAACGAAATGGGTTTCTTGATGCCCAAAGGAGAACCAACTGTTGAGCCTACTCCAGAACGCGGCCTTAACCTGCCCGGTAGTTCATCAGTGTATCAAGAAATTATGAGCCGGATGCCCCACATGTAA 2409 0.4408 MKLLSFFRQVRDETELLLLSVRFSLFGIFSIILASIQQLINSVCSLGVVFPKVCMAGIDDNVAPTADWGLPVPSPRTIFSRMFDEDNVTLPISETPGSAITEVLFQGTQDPNSAGISNVKDRLQDGTSDGQLSDRSSLSEQKSSSQRGLVERMAARAGFNAPRLNTESIRPADLSHNSDIRSPYLTIPPGLSPTTLLDSPMFLSNSLAQPSPTTGKFPFISNGSNRCSELSTDAPEKSKDNSYDDIYASSFAFKPATDLGSAFYQGAARKMNTTILPHQSLAGIEVSVQSENYFQSQGVDSVKDKNENKIGLHLQPGFIDLPMQKDNASNFVSTDQRAFDNVGGSTEHSTPLELQEDEDEDQGGNGDSMISGVGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGVHNHSKPPPNRRSAVGSVNSLVDISERVEPESDNNGDLHQTSAQKVNVTGAAECKLDNREVTSASAAPEYCNQSTNLQTQNGTDFESGDAVDMSSTFSNDEGEDNQGTHGSVSLGYDGEGDESESKRRKLESYSAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDVKSVITTYEGKHNHDVPAARSSSHVNAAAAAASSTVAVQASTGIQTHHVHNHRSETSQLQIGGGIGSLERPAALPLGSFNLPGRPQLVPSHGFSFGMSNVGIPGFGPPAQPKLPFMSVHPFLAQQRAPNEMGFLMPKGEPTVEPTPERGLNLPGSSSVYQEIMSRMPHM 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2781 802 Gene3D WRKY domain 577 643 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 MobiDBLite consensus disorder prediction 502 564 - -
Dere04g2781 802 MobiDBLite consensus disorder prediction 111 148 - -
Dere04g2781 802 ProSiteProfiles WRKY domain profile. 585 650 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 FunFam WRKY transcription factor 33 577 643 - -
Dere04g2781 802 Pfam WRKY DNA -binding domain 379 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 Pfam WRKY DNA -binding domain 591 647 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 MobiDBLite consensus disorder prediction 338 383 - -
Dere04g2781 802 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 303 675 IPR044810 GO:0003700
Dere04g2781 802 MobiDBLite consensus disorder prediction 428 447 - -
Dere04g2781 802 FunFam WRKY transcription factor 369 438 - -
Dere04g2781 802 MobiDBLite consensus disorder prediction 502 542 - -
Dere04g2781 802 SUPERFAMILY WRKY DNA-binding domain 582 650 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 SUPERFAMILY WRKY DNA-binding domain 377 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 ProSiteProfiles WRKY domain profile. 379 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 Gene3D WRKY domain 372 438 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 MobiDBLite consensus disorder prediction 549 563 - -
Dere04g2781 802 SMART WRKY_cls 590 649 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 SMART WRKY_cls 378 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2781 802 MobiDBLite consensus disorder prediction 111 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2781 Dere-ChrDere04 38397772 38403570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2781 55 802 WRKY Transcription Factor Family AT5G56270 47.134 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere04g2781 WRKY 5.6e-24 CL0274