Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2780 ATGAAGAGAGAGACGAGAATATCATGTTCATGGTCAGGAGGATCACATGGGGTGGTGGGTTCTGTAATTTTTGTCATCTTCTACCTCATGATTGGTGTCTCAGAGACAAGTGGCAGATTCGCTTTGCTGCAACAAGTCGACAATAATGAAGCTGCAAATTCAGAAGTTGCGTTGCTTATGGGTTTCAAGCAGTGTTGTGTTTCCTCTGATCCCAACAATTTCCTATACGACTGGTCTGCTCGTTCTGCAACTCCATGTCACTGGAAAGCTGTGTCTTGCTCTTCCCAAGGCCTCGTCACTACACTCAACCTCACTGGTGCAGGTCTTACTGGTACCGTACACCTTCCTCGTCTCTCTGCTTTGCCTGCTCTTCGCCATCTTCTCTTGCATGGAAATTCCTTCACTATCAATGGCGATACGACGTCGTCTTGCTCTCTTCAGACTCTCGACCTCTCTGCAAACAACTTGTCTGGCTCTTTCCCAGATTCTCTCTCCATTTGTGACGGCCTCACTCTGCTCAATCTCTCCCAGAACCACCTCACCATCCCTGCGTCATCATATCTCTTCCCTGAATTTCCTTCCCTCAACCAATTGGATCTTTCCAGCAACAACCTCTCTGAGCTCTTCGGTTTTGTGAACTGCACCAGTCTTGTTTCTCTTCGTCTATCCTACAACACCATTTCTGACACTCAATTCCCACCAAGCCTCACAACCTGTCAGGCTCTTGAGATTCTGGATCTGTCCCATAATCAACTTCGCTTCAAGATTCCAGGTGGCTTCCTGGGGAGTCTCAAGAGCTTGAAGCAGCTATTTCTGAGTCATAATGAGTTGTCTGGAGAAGTGCCTGCTGAATTGGGAATGGCTTGTGGGTCCCTCATGGAGCTGGATCTGTCAAACAACAAGCTTTCTGGTGATTTGCCTTCCACCTTCGCGGCATGCTCGTCTTTGCAGAGTCTCAACCTTGGTAAGAACAAGCTCTCTGGAGACTTCCTTCACTCTGTCATCCCCAAGCTTTCAAGCTTGAAGTACCTCTACGTGCCTTTCAATAACATAAGTGGGCCTCTTCCTCTGTCTCTCTCTCAGTGTGCTCAGCTTCAGGAGCTTGACCTCAGTTCTAATGCCTTCACAGGCAATATTCCTTCTGGATTGTTCTGCTCCTTCGCTGCATTGGAGAAGGTACTCTTAGCTGGTAATTATCTTTCTGGGACAATACCTTCAGAGATTGGAAAATGCAACAAGAAGTTGAGGACTATGGATTTCAGCTTCAACAATTTGAATGGTCCAATACCATCGGAAATTTGGTTCTTGCCTGATCTTTCTGACTTGATTATGTGGGCAAACAACCTCACAGGTCACATCCCTGACGGTATCTGCATCAATGGTGGAAACTTACAGACCATGATTCTTAACAACAACTTCATTTCAGGCACCATTCCTCAGTCAATAGCCAACTGCTCCAGCATGATTTGGATCTCCCTCGCCAGCAATCGGATCACCGGCGAGATTCCGGCCGGTATTGGGAATCTAAATGAACTTGCTATCCTCCAATTGGGTAACAATTCACTCACGGGACGCATCCCACCTGAGCTTGGCAAGTGTAGGAGCCTCATATGGCTGGATTTGACTAGTAACAACCTAACTGGTACCATACCGGCCGAGCTCGCCGATCAGGCCAGCTTGATCGTTCCGGGCAGTGCTTCTGGGAAGCAGTTTGCATTTGTGAGAAATGAAGGTGGGACAAGCTGTAGGGGTGCTGGGGGTCTGGTTGAATTTGAGGATGTGAGAGCAGAGAGGCTAGAGAATTATCCTATGGTGCATTCATGCCCATTGACAAGAGTATACTCAGGAACCACAGTGTATACCTTCACCAGCAATGGCAGCATGATCTACCTTGATCTCTCCTACAATTCCTTGTCAGGAAGTATTCCTGAAAGCTTTGGTGGTATGAACTTCTTACAGGTCTTGAATTTGGGACATAATAGGCTAATGGGAAACATTCCTGACAGCTTTGGTGGTCTGAAATATATAGGAGTGCTAGATCTGTCCCATAACAATCTTCAAGGATTCATCCCTGGCTCATTAGGAATGCTATCTTTCCTCAGTGACTTTGATGTTTCTAATAATAACCTCACAGGCTCCATTCCTTCTGGGGGTCAGCTTACCACTTTCTCCGCCTCAAGATACGAAAATAACTCAGGACTTTGTGGCATCCCCTTACCCCCTTGTGGCTCTGCAAATCACTCACCAGCTCTTCAAACTATGGAGAAGAAGCAGTTTTCGTCCAAGGATATGGTACTTGTCCTCGTGCTCTCCCTCTCGTGTGTTCTAGCAATAGGATTAGCTCTGTATCGAGTAAAGGAAAGGAGGAATAATGATCAATGGAGAGAGAAATACGTAGAAAGCCTTGCAGCTTCAGGAAGTAGCTGCTGGAAACTAGACAGCATTCCTGAGCCTTTAAGCATCAATGTTGCAGCCTTTGAGAAGCCTTTGCGTAAGCTCACATTTCGTCATCTTCTTGAAGCTACCAATGGTTTCAGTGCTCAGAGCTTGATAGGGTCTGGAGGGTTTGGTGAAGTGTACAAAGCTAAGCTCAAAGATGGGTGTGTTGTAGCTATCAAGAAGCTCATTTACGTCACAGGTTGTCAGGGAGAGAGGGAGTTCATGGCAGAAATGGAAACTCTGGGAAAGATCAAGCATCGAAACCTCGTCACTCTTCTGGGTTACTGCAAGATAGGAGAGGAGAGGCTTCTTGTGTACGAGTACATGAAGCTAGGGAGTCTGGAGTCTGTTCTTCATGACAATGGAGGAGGAGGATCAAGGCTTGACTGGGCAGCGAGGAAGAAGATCGCCATCGGAGCTGCGAGGGGTCTGGCTTTTCTTCACCATAGCTGCATACCCCACATCATACACAGAGACATGAAGTCCAGCAATGTTCTTCTTGACGAAAACATGGAAGCTAGAGTCTCTGATTTTGGCATGGCAAGGTTGGTGAATGCACTTGACACTCATATCAGTGTAAGCACCATTGCAGGAACACCAGGCTACGTGCCTCCAGAATACTACCAGAGTTTCAGATGCTCAACAAAAGGGGACGTGTACAGCTACGGCGTCATACTGCTCGAGCTTCTGTCGGGAAAGAGGCCGACCGACTCGTCGGAGTTCGGGGATGACAACAATCTGGTCGAATGGGCTAAGCAGCTTCAGAGAGAGAAGAGGATGAAGGAGATACTGGATCCTAATTTGACTGTGGATTCACAGACATGTAATGAAAGTGAACTGTATCATTGTCTAAGAATTGCGCTTCAATGTGTAGATGAGAGGCCAAACCGAAGGCCAACGATGATACAGGTGATGGCGATGCTCAGAGAGATTGAGGTTGACTCTGAAAGTGACATTCTTGATGGGCTTCCACTGAATCAGAGTGTTATTCATGAGGAAGCATGCATTGACAATGAAAAATCTGAGAATTGA 3471 0.4685 MKRETRISCSWSGGSHGVVGSVIFVIFYLMIGVSETSGRFALLQQVDNNEAANSEVALLMGFKQCCVSSDPNNFLYDWSARSATPCHWKAVSCSSQGLVTTLNLTGAGLTGTVHLPRLSALPALRHLLLHGNSFTINGDTTSSCSLQTLDLSANNLSGSFPDSLSICDGLTLLNLSQNHLTIPASSYLFPEFPSLNQLDLSSNNLSELFGFVNCTSLVSLRLSYNTISDTQFPPSLTTCQALEILDLSHNQLRFKIPGGFLGSLKSLKQLFLSHNELSGEVPAELGMACGSLMELDLSNNKLSGDLPSTFAACSSLQSLNLGKNKLSGDFLHSVIPKLSSLKYLYVPFNNISGPLPLSLSQCAQLQELDLSSNAFTGNIPSGLFCSFAALEKVLLAGNYLSGTIPSEIGKCNKKLRTMDFSFNNLNGPIPSEIWFLPDLSDLIMWANNLTGHIPDGICINGGNLQTMILNNNFISGTIPQSIANCSSMIWISLASNRITGEIPAGIGNLNELAILQLGNNSLTGRIPPELGKCRSLIWLDLTSNNLTGTIPAELADQASLIVPGSASGKQFAFVRNEGGTSCRGAGGLVEFEDVRAERLENYPMVHSCPLTRVYSGTTVYTFTSNGSMIYLDLSYNSLSGSIPESFGGMNFLQVLNLGHNRLMGNIPDSFGGLKYIGVLDLSHNNLQGFIPGSLGMLSFLSDFDVSNNNLTGSIPSGGQLTTFSASRYENNSGLCGIPLPPCGSANHSPALQTMEKKQFSSKDMVLVLVLSLSCVLAIGLALYRVKERRNNDQWREKYVESLAASGSSCWKLDSIPEPLSINVAAFEKPLRKLTFRHLLEATNGFSAQSLIGSGGFGEVYKAKLKDGCVVAIKKLIYVTGCQGEREFMAEMETLGKIKHRNLVTLLGYCKIGEERLLVYEYMKLGSLESVLHDNGGGGSRLDWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDENMEARVSDFGMARLVNALDTHISVSTIAGTPGYVPPEYYQSFRCSTKGDVYSYGVILLELLSGKRPTDSSEFGDDNNLVEWAKQLQREKRMKEILDPNLTVDSQTCNESELYHCLRIALQCVDERPNRRPTMIQVMAMLREIEVDSESDILDGLPLNQSVIHEEACIDNEKSEN 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2780 1156 Gene3D Ribonuclease Inhibitor 191 743 IPR032675 -
Dere04g2780 1156 FunFam Serine/threonine-protein kinase BRI1-like 1 566 623 - -
Dere04g2780 1156 Gene3D Phosphorylase Kinase; domain 1 810 921 - -
Dere04g2780 1156 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 91 258 - -
Dere04g2780 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Dere04g2780 1156 Pfam Leucine rich repeat N-terminal domain 52 94 IPR013210 -
Dere04g2780 1156 SMART LRR_typ_2 362 386 IPR003591 -
Dere04g2780 1156 SMART LRR_typ_2 289 312 IPR003591 -
Dere04g2780 1156 SMART LRR_typ_2 509 533 IPR003591 -
Dere04g2780 1156 SMART LRR_typ_2 121 144 IPR003591 -
Dere04g2780 1156 SMART LRR_typ_2 192 213 IPR003591 -
Dere04g2780 1156 SMART LRR_typ_2 436 460 IPR003591 -
Dere04g2780 1156 SMART LRR_typ_2 649 672 IPR003591 -
Dere04g2780 1156 SMART LRR_typ_2 239 262 IPR003591 -
Dere04g2780 1156 SMART LRR_typ_2 264 288 IPR003591 -
Dere04g2780 1156 Pfam Brassinosteroid receptor island domain 560 623 IPR045381 -
Dere04g2780 1156 ProSiteProfiles Leucine-rich repeat profile. 194 215 IPR001611 GO:0005515
Dere04g2780 1156 FunFam serine/threonine-protein kinase BRI1-like 2 922 1131 - -
Dere04g2780 1156 Pfam Leucine Rich repeat 213 229 IPR001611 GO:0005515
Dere04g2780 1156 ProSiteProfiles Protein kinase domain profile. 845 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2780 1156 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 384 563 - -
Dere04g2780 1156 SUPERFAMILY L domain-like 619 743 - -
Dere04g2780 1156 Pfam Leucine rich repeat 621 662 IPR001611 GO:0005515
Dere04g2780 1156 Pfam Leucine rich repeat 291 351 IPR001611 GO:0005515
Dere04g2780 1156 FunFam Leucine-rich repeat receptor protein kinase EMS1 232 333 - -
Dere04g2780 1156 FunFam serine/threonine-protein kinase BRI1-like 2 806 921 - -
Dere04g2780 1156 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 621 740 - -
Dere04g2780 1156 Pfam Protein kinase domain 847 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2780 1156 ProSitePatterns Protein kinases ATP-binding region signature. 851 874 IPR017441 GO:0005524
Dere04g2780 1156 SUPERFAMILY Protein kinase-like (PK-like) 831 1133 IPR011009 -
Dere04g2780 1156 Gene3D - 566 623 - -
Dere04g2780 1156 Pfam Leucine Rich repeats (2 copies) 241 277 IPR025875 -
Dere04g2780 1156 Gene3D Transferase(Phosphotransferase) domain 1 922 1135 - -
Dere04g2780 1156 SUPERFAMILY RNI-like 149 557 - -
Dere04g2780 1156 Gene3D Ribonuclease Inhibitor 54 168 IPR032675 -
Dere04g2780 1156 SMART serkin_6 845 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2780 Dere-ChrDere04 38383613 38387083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2780 54 1147 Receptor kinase-like Gene Family AT1G55610 63.204 0.0 1405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dere04g2780 Pkinase 1.6e-47 CL0016