Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2777 ATGGCCACCAATCCTCAAATTCTCCACCAAAGTGCTTCCCACGAAAGTGATGCATCAGACCCACTTGGGTGGGGCGTAGCAGCTGAGTCACTCACCGGCAGCCACCTGGATGAAGTGCGACGCATGGCGGCCGACTACTGGAAGCCGGTGGTCCGGCTCGGAGGCGAGGCGCTGTCCGTTGCGCAGGTGGCGGCGGTGGCGAACGGCGGCTCTCGAGTGACCGTTGAGCTGTCGGAGTCGGCGAGAGTCGGCGTCATGGCGAGCACTGATTGGATCTTGGAAAGCGTCAAGAATGGCACTCCCATTTACGGTGTCACCACCGGCTTTGGAGCTTCCTCCCACAAGCGAACCAACCAAGTTACCGCCCTCCAGAAGGAGTTAGTTAGGTTCTTAAACTGCGCAATATTCGACAAGGGAAGAGACCAATGGCACACTCTGCCTCAGCCCGCAAGTAGAGCCGCCATGCTCGTGAGGGTCAACACACTTCTTCAAGGCTTCTCCGGCATCAGATTCGAAATCCTAGAAGCCATCACCAAACTCCTCAACCACAACATCACTCCCTGCTTGCCCCTACGTGGCACAATAACAGCCTCCGGTGACCTCATCCCTCTCTCCTACATCCTCGCCTTGCTCGTCGGTCGGCCAAACTCTCAAGCCCTAGGACCTTCCGGCGAGTTCCTCGACCCCAAACAAGCCTTCCTTTTAGCAGGCATAAATACGGATAGGGATACGGATACGGGTAGCGTCAGGTTCTTTGAGTTGCAGCCGAAGGAAGGACTTGCTATGGTAAACGGCACTGCCGTTGGATCGGGCTTGGCTTCAATTGTGCTTTTTGAAGCAAATGTGTTAGCTTTACTGTGTGAAGTTCTTTCTGCCGTTTTCGCTGAAGTAATGCAGGGGAAGCCAGAGTTTACGCACCATATGATACATAAGCTTAAGCATCATCCTGGTCAGATTGAAGCTGCTGCGATCATGGAGCATATTTTAGACGGAAGTTCTTATGTGAAGGATCAGTCACAGAAATCAGGAAAGCCCAAGAAAGAACGATATGCTCTTATAACTTCTCCTCAGTGGTTAGGACCACAGATTGAGGTTATCAGATATTGTACGAAGTCCATCGAGAGGGAGATAAACTCAGTGAACGACAATCCTTTGATTGACGTTTCGAGGAACAAGGCTTTTCATGGTGGTAACTTCCAAGGCACACCCATTGGAGTTTCCATGGACAACGCGCGTCTAGCTCTCGCTTCCATAGGCAAACTTGTGTTTGCTCAGTTCACTGAGCTCGTAAACGACATGTACAACAATGGGTTGCCATCGAATCTCTCTGCTTCTAGAAACCCAAGTTTGGATTATGGGTTTAAAGCATCAGAAGTTGCAATTGCGTCGTATTGTTCAGAGCTTCAGTTTCTGGGAAACCCAGTGACGACACACGTGCAAAGCGCAGAGCAACACAACCAAGACGTGAACTCCTTGGGTTTGATCTCTGCGAGAAAAACTGCTGAAGCTGTTGAGATCTTGAAGCTCATGTGTGCCACTTACGTGGTTGCACTATGTCAAGCTATTGACTTGAGGCACATGGAGGAAATCTTCAAGATCACAGTCAAGAACACTGTGGGCCAAGTGGCGAAGAAGACTCTAACTCTAGCCAGAGATAACCCATTTACAGTTTGTGATGAAGATTTAATGGAAGTGGTTGATAGAGAGTACGTATTTTCCTACATTGACGATCCCTGCAATGCTGCGTACCCATTGATGCCAAAACTGAAGCAAGTACTGTATGAGAAAGCACACTCGAGTGCTGTTAGAGAGAACTACGATGTGAAAAGTGGTTCAGTTTTTGAGAAGATTGGAGGATTTGAGGATGAACTGAAGCGTGTGATGCCAGAGGAAGTTGAAAGAGCAAGAGTGAGTTATGAGAATGGTGATGCAGAGATTCCAAATAAAATCATGAAATGCAGGTCGTACCCATTGTACAGGTTTGTGAGGGAAGAGTTGGGAACTACGTTGTTGAGCGGAGAAAAGATGACGTCACCAGATGAGGACTTTGATAAAGTGTTTAAAGCAATCAGTGACGCAAGGATTGTTCATCCACTTCTGGAATGCCTTGCAGATTGGAAAGGAGTTCCTGTCACAGTATAA 2142 0.4879 MATNPQILHQSASHESDASDPLGWGVAAESLTGSHLDEVRRMAADYWKPVVRLGGEALSVAQVAAVANGGSRVTVELSESARVGVMASTDWILESVKNGTPIYGVTTGFGASSHKRTNQVTALQKELVRFLNCAIFDKGRDQWHTLPQPASRAAMLVRVNTLLQGFSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLIPLSYILALLVGRPNSQALGPSGEFLDPKQAFLLAGINTDRDTDTGSVRFFELQPKEGLAMVNGTAVGSGLASIVLFEANVLALLCEVLSAVFAEVMQGKPEFTHHMIHKLKHHPGQIEAAAIMEHILDGSSYVKDQSQKSGKPKKERYALITSPQWLGPQIEVIRYCTKSIEREINSVNDNPLIDVSRNKAFHGGNFQGTPIGVSMDNARLALASIGKLVFAQFTELVNDMYNNGLPSNLSASRNPSLDYGFKASEVAIASYCSELQFLGNPVTTHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMCATYVVALCQAIDLRHMEEIFKITVKNTVGQVAKKTLTLARDNPFTVCDEDLMEVVDREYVFSYIDDPCNAAYPLMPKLKQVLYEKAHSSAVRENYDVKSGSVFEKIGGFEDELKRVMPEEVERARVSYENGDAEIPNKIMKCRSYPLYRFVREELGTTLLSGEKMTSPDEDFDKVFKAISDARIVHPLLECLADWKGVPVTV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2777 713 MobiDBLite consensus disorder prediction 1 17 - -
Dere04g2777 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 193 209 IPR022313 GO:0016841
Dere04g2777 713 NCBIfam phenylalanine ammonia-lyase 20 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Dere04g2777 713 Gene3D Fumarase/aspartase (Central domain) 267 708 - -
Dere04g2777 713 Gene3D - 528 648 IPR023144 -
Dere04g2777 713 PANTHER HISTIDINE AMMONIA-LYASE 15 711 IPR001106 -
Dere04g2777 713 MobiDBLite consensus disorder prediction 1 21 - -
Dere04g2777 713 Pfam Aromatic amino acid lyase 58 527 IPR001106 -
Dere04g2777 713 SUPERFAMILY L-aspartase-like 20 711 IPR008948 GO:0003824
Dere04g2777 713 Gene3D - 11 266 IPR024083 -
Dere04g2777 713 CDD PAL-HAL 56 525 IPR001106 -
Dere04g2777 713 FunFam Phenylalanine ammonia-lyase 11 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2777 Dere-ChrDere04 38264362 38268158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2777 17 713 Monolignol Biosynthesis Gene Families AT2G37040 68.227 0.0 1010