Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2765 ATGGGTCGCTCCAGAGCCGCGTCGCGCCAAGCTGATGAAGACCCCAATCAAAGATCCAAGAGAAAAAAGGTGGCTTTAAATGCTGAGAACTTGGAAACTTCAAGTACAGGCCATGGAATAAATGAAGGGAAAGTTTCTCTTTACCATTGTAATTATTGCAACAAAGATATTTCCGAGAAGATCCGCATTAGGTGTGTTGTGTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTCCGTTGGAGCTGAGGTGAAACCTCACAAAAGCAATCATCCTTATAGGGTCATGGATAATCTATCTTTTCCACTTCTGTGTCCAGACTGGAATGCAGATGAAGAGATGTTGCTTCTGGAGGGCATTGGAATGTATGGATTTGGAACTTGGACTGAAGTAGCAGAATGTGTTGGAACAAAAACCAAGTCTCAATGTATTGACCACTATAATGCTGTTTATATGAATTCACCTTGCTTTCCTCTCCCTGATTTGTCTCATGTTATGGGAAAGAGTAGAGAGGAGCTCCTTGCTATGGCCAAGGGGCATGCTGAAGTTAAGAAGGCAGATTGTCCTCCAAATGCAGAGCTTACACCAAAAGAAGAGCCCCCTTTCTCTGCAGTAATAAACTCTGAGGAATCTAAAAAGAAAGAACCTTCTTGTCAGACATTGTCTAGCTTAACTTCAGGTGTTGATGTGGGTATAGTTTGTGGCAAAGTTTACTCAAGTACAGTTAATAAGGATTCCAACACTAACCATATTAATGACGGGCTTAAAATGAAAGTTGAATCTCAAGCTGATCGGAGCATTGGAGAGAAAAAACCTAAATTATTTGGGGAAGATGGGTCATGTATGGCGGAGTTGAGTGGATACAATTTCAAGAGAGAAGAATTTGAGATTGAATATGATAATGATGCAGAACAAGTATTGGCAGATATGGAATTTAAGGACACTGATACTGAAGCTGAACGTGAAATGAAACTACAAGTGCTCCGTATTTACTCCAAAAGGTTAGATGAGCGGAAGCGGAGGAAGAATTTTATCCTTGAAAGAAATTTGCTTTATCCTGACCCCTTTGAGAAATCTTTCTCACCTGAAGAGCAACAAATATGTCAGCGCTACAAGGTCTTCATGCGGTTTCACTCAAAAGAAGAGCACAATGAGTTGCTCAAAAATATTATCGAAGAACATCGTATTGTTAAAAGAATACAAGATCTACAGGAAGCTCGAGCAGCTGGATGTCGCACATCTGCTGATGCATATAAATTCATTGATCTCAAGAGGACAATGGAAGCTGATCAAAGTGCATATAAAGAAAGTGGCAAGGATTCACCTGCGGCAATACAAGCTCTCTTAAAGTCCCTAGATGATTGGAATGTCACTGAGATTACAGGAGCTGAGTTACTATCGCAATCTGAGAAAGAGCTTTGTAACGAGATCAGAATTCTACCGTCACATTATCTCAACATGCTGCACATCATGTCATTAGAAATAACAAAGGGCAATGTGACCAAGAAATCTGATGCCTATACCCTCTTCAATGTAGAACCAAACAAGGTTGATAGAGTATATGACATGCTTGTGAAAAAGGGGATTGCTCAAGAGTGA 1599 0.404 MGRSRAASRQADEDPNQRSKRKKVALNAENLETSSTGHGINEGKVSLYHCNYCNKDISEKIRIRCVVCQDFDLCIECFSVGAEVKPHKSNHPYRVMDNLSFPLLCPDWNADEEMLLLEGIGMYGFGTWTEVAECVGTKTKSQCIDHYNAVYMNSPCFPLPDLSHVMGKSREELLAMAKGHAEVKKADCPPNAELTPKEEPPFSAVINSEESKKKEPSCQTLSSLTSGVDVGIVCGKVYSSTVNKDSNTNHINDGLKMKVESQADRSIGEKKPKLFGEDGSCMAELSGYNFKREEFEIEYDNDAEQVLADMEFKDTDTEAEREMKLQVLRIYSKRLDERKRRKNFILERNLLYPDPFEKSFSPEEQQICQRYKVFMRFHSKEEHNELLKNIIEEHRIVKRIQDLQEARAAGCRTSADAYKFIDLKRTMEADQSAYKESGKDSPAAIQALLKSLDDWNVTEITGAELLSQSEKELCNEIRILPSHYLNMLHIMSLEITKGNVTKKSDAYTLFNVEPNKVDRVYDMLVKKGIAQE 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2765 532 PIRSF Txn_adaptor_ADA2 435 532 IPR016827 GO:0003713|GO:0006357|GO:0035065
Dere04g2765 532 PIRSF Txn_adaptor_ADA2 35 450 IPR016827 GO:0003713|GO:0006357|GO:0035065
Dere04g2765 532 Gene3D - 103 153 - -
Dere04g2765 532 Gene3D - 42 96 IPR043145 -
Dere04g2765 532 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 48 527 - -
Dere04g2765 532 MobiDBLite consensus disorder prediction 1 27 - -
Dere04g2765 532 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Dere04g2765 532 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Dere04g2765 532 SMART zz_5 44 89 IPR000433 GO:0008270
Dere04g2765 532 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Dere04g2765 532 FunFam Transcriptional adapter 2 101 153 - -
Dere04g2765 532 SMART sant 104 153 IPR001005 -
Dere04g2765 532 FunFam Transcriptional adapter 2 449 531 - -
Dere04g2765 532 Pfam Myb-like DNA-binding domain 107 148 IPR001005 -
Dere04g2765 532 FunFam Transcriptional adapter 41 96 - -
Dere04g2765 532 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Dere04g2765 532 CDD ZZ_ADA2 48 96 IPR041983 -
Dere04g2765 532 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Dere04g2765 532 SUPERFAMILY RING/U-box 48 111 - -
Dere04g2765 532 SUPERFAMILY Homeodomain-like 450 530 IPR009057 -
Dere04g2765 532 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Dere04g2765 532 MobiDBLite consensus disorder prediction 1 28 - -
Dere04g2765 532 Gene3D - 447 531 IPR036388 -
Dere04g2765 532 ProSiteProfiles SWIRM domain profile. 446 532 IPR007526 GO:0005515
Dere04g2765 532 CDD SANT 108 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2765 Dere-ChrDere04 38019276 38039741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2765 1 530 EF-hand Containing Proteins AT3G07740 55.009 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere04g2765 Myb_DNA-binding 3.4e-10 CL0123