Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2757 ATGAAAGTGCAGCTGATGCAGAAGAGGAAGAGAAGAGTGGCCAAGGCAAACAAACAAACAGAGAAGTGTCAGGCTGGGGAGAAGAAAAGGAAAGGGGACCAAACTGAAGGGGAAGAAAGTGGTAAGTCTGTTGAAGAGTTCTTGTTAGCTTTACTTTGTGCATTGCATAAGCTCCCCATGAATCTTCAGGTACTGCAAACCTGTAATGTTGGAAAGTCTATCAATAATTTGCATAGTCGTAAAAATTTTAAAATTCAAAAGAAAGCAAGGAGTTTAGTTAACACATGGAAGAAACGTGCTGAGGCTGAAATGATTAAAAATGATGAAAAATCTGGTTCAACCTGGGCCTTTTCTTGGTCAGCAAAGCCAACACCTTCTGAGGTTTCTCAAACTGGAAATAGGAAAACAGGAGGATCTATTGAGGTCACTGCAAGGTGCTCTACAACGCAAAGCATGGCATCTAAAAGTTCCCAAGCTAAGCCTAGCACTGGAGAAGCATTGTCTAAATCCTCTCAATATCCTAGTTTAGCAAAATCAATTAATGCTTTAGTGGGTTGCAATTCAAAGTAG 570 0.4035 MKVQLMQKRKRRVAKANKQTEKCQAGEKKRKGDQTEGEESGKSVEEFLLALLCALHKLPMNLQVLQTCNVGKSINNLHSRKNFKIQKKARSLVNTWKKRAEAEMIKNDEKSGSTWAFSWSAKPTPSEVSQTGNRKTGGSIEVTARCSTTQSMASKSSQAKPSTGEALSKSSQYPSLAKSINALVGCNSK 189
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2757 189 SMART TFS2_5 23 102 IPR003617 GO:0005634
Dere04g2757 189 ProSiteProfiles TFIIS N-terminal domain profile. 26 103 IPR017923 -
Dere04g2757 189 MobiDBLite consensus disorder prediction 1 16 - -
Dere04g2757 189 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 3 114 IPR035441 -
Dere04g2757 189 Pfam TFIIS helical bundle-like domain 51 98 IPR017923 -
Dere04g2757 189 MobiDBLite consensus disorder prediction 1 39 - -
Dere04g2757 189 MobiDBLite consensus disorder prediction 17 39 - -
Dere04g2757 189 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 45 112 IPR035441 -
Dere04g2757 189 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 27 178 - -
Dere04g2757 189 MobiDBLite consensus disorder prediction 116 172 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere04g2757 Dere-ChrDere04 37554114 37554683 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dere04g2757 Med26 7e-12 No_clan