Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2738 ATGGAAGTCACTAGCACCTGTAATGGCAGTAGCATGATGTGGTTTTTTAAGGATAGAGGATTTGATGATAAAAGCATACAAGGAATGTTCAGAAAGTGCAAACGCCTTGAGGGTGTGCACCGAGAAAGAGCATCTGAGAATTGGGCTTATTTGAAAAGCATTGGCATTCAAGAGAGGAAACTTCCGTCCATTGTTTCAAAGTGTCCCAAGATTCTTATGCTTGGTCTTAATGAGAAGATAGTGCCCATGGTCGAGTGCCTCAAGACACTGGGAACAAAACCCAATGAAGTTGCTTCTGCCATTGCCAAGTTCCCTCATTTATTGTCGCATAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCCTTCTTCCAGGCATTGGGCATCCCTGATAAACGGCTTGGAAAAATAGTACTGCTCAACCCAAGGCTTATTAGCTACAGCATTGAAACAAAGCTCACAGAAATTGTGGACTTCCTTGCCAGCCTTGGTCTGGATAAAGATGGAATGATTGGAAAAATTTTAGTGAGGAACCCATTTATTATGGGATATAGTGTTGATAAAAGGCTCCGTCCGACATCGCAGTTTCTGAAGTCAATAGGTCTGACTGATCTAGAACTTCAATTGGTGGCTGTGAACTTCCCAGAAGTCTTGAGTAGAGATGTGAACAAGGTTTTGGAACCCAATTATGCTTATTTAAAGAAACGTGGATTTCATGACAGACAAATAGTTGCTTTGGTGGTTGGATTTCCTCCAATCCTGATCAAAAGCATACAAAATTCTCTGGAACCTAGGATCAGGTTTTTAGTAGATGTAATGGGGAGACAACTTGATGAAGTTGTCGATTACCCTTGCTTCTTTCGTCATGGTCTGAAGAGAGAAATAGAGTTGCGGTACAGATTTCTAAAGCAGAGGAACTTAAATTATGGCTTGAGTGAAATGCTTGACTGTAATAAGAAGAAGTTCTTCTTAAAGTTTGGTTTATTAGAAGGACATTCCCAAATATAG 1005 0.407 MEVTSTCNGSSMMWFFKDRGFDDKSIQGMFRKCKRLEGVHRERASENWAYLKSIGIQERKLPSIVSKCPKILMLGLNEKIVPMVECLKTLGTKPNEVASAIAKFPHLLSHSVEEKLCPLLAFFQALGIPDKRLGKIVLLNPRLISYSIETKLTEIVDFLASLGLDKDGMIGKILVRNPFIMGYSVDKRLRPTSQFLKSIGLTDLELQLVAVNFPEVLSRDVNKVLEPNYAYLKKRGFHDRQIVALVVGFPPILIKSIQNSLEPRIRFLVDVMGRQLDEVVDYPCFFRHGLKREIELRYRFLKQRNLNYGLSEMLDCNKKKFFLKFGLLEGHSQI 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2738 334 Pfam mTERF 111 321 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 Pfam mTERF 15 122 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 Gene3D Transcription termination factor 3, mitochondrial 95 328 IPR038538 -
Dere04g2738 334 PANTHER CGI-12 PROTEIN-RELATED 133 253 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Dere04g2738 334 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere04g2738 mTERF 4.2e-44 No_clan