Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2715 ATGTCGCCGGCGTTGGTAGTTCCCAGAGCTCCGGTGCATACTGACGATCTCACTGGTCGGGCTTCTCATTCAATATCCTTCGATTTTTCTGGGTTTTCTCCATTTGGCCAATTCGAACGACATCAAAGGTCACCACACGACATGGAACCATCCAATGCTATGGATGGAGCTTCTGGGATTTCGAAATCAAATGCCCAGAATACAAATTTCACCTTCAGCACCTCTTCAGCTTCAGCTTCAGCTTCGCGACCGGTTTCGGGCCTGTCGAGGCCGAGATTCATGAAGGTTCGGAAGCAGAGCAATGCTCAAAGTTTGAGGTCGACGACAGGGATCGAGGAGATTCAGGTTGCTCCTGGTTTCAATCCATTTTGTCCTGTTCGCGATTGTTCGGTTCGACCCTTTTCTGGGTCGGGGATGGGTTCGTCGTCTATATTCAGTATAAGTGATGCTGGTCAGACTGGGAATGAACCATTTATCTTTGGAACGAAGAGCAGTGATTCGGGTTCAAATTTAAACATGGGCAACACTGGTTCTGGTGGAAATGTCGACCATGAAATTATTGATCGAATGAGGAATCTGAAAATGGGCAATGTGAATGAGGTTTCAAACGTTAAAGATATGGGTTATAAGAAGGGCGAGTTTGCATTTGAGTGTGGTCATAAGAAGAGTTCCAGTCATGATGGAGACTTTGTGTCAAAGCTTCCAGAAGACATAAGTAAGTTGCATACTCGTGGAATTGACGACAATGGCAAAACTAAAAGCGGAGGTTTAAATACATATGCAGATGATTGTTTTAAATTCACATCTGGTAGTAAAGACAACACTAGTGGTTCTTCCTATGTCGAATCAGAACTCCAAAATGAGTTGAAAAAGAAATTAAGTTTTAAAGAAAGCGGTGCTGGTGATCTACATATTGATAACTCAACAAATGCAGTTCTCAACCAACTGAAGAATCTGAATGTGAAGGATTCTTCGGGTATTGACAATGTTCAGAAGAATGAAGTTGATGTAATGACTGGTGGGAAAAAAAAATCTGCTTCTGCAAGCAGTAAAACACCTTCTAGTTACATTGGGGGAAGAACAGAGTCCATTCTGTCGAGAAAAATGGAGAAGCTAAAGGTAGTCAGTGAGAAGGGGGACTTTACTAAACCAAAATTTTGGAATCCTTCCTCTCAGGAATCTGTGGAGGAAATTAACCAGACAGATTTAAGTGGTGATCAAGTTCCTTCAGACAAACCCAAGGAAAACATCAGAATGGTACAAAATGCTGCACCATCTTCCTCATTCTTATCTGGGGGCATAACCTTTTCAATGGTTGAAAATGCCTTTGGAGGTACAAAGAGAGATGAATTTGTCTTTACAGGAAAGAAAGATGATTCAGGCTCATCTTTTGTTGAGTTCAAAACACCAGCATCAAATAAGGAACAAAGTAGCAACAGAAGAATGAAGAAAAGGAGAGGTAAACCGAAACTGTCTACCCCAGTTCTGCCGTTGCATGGCCAAGATTTTGTTTCAATGGAAAATGTTTCCGAAGAAAACTCTGAGGCTTCTGAGGCTTATTCACCAATGGATGTGTCTCCGTATCAGGAAACAAGGACTGAAACTCAATGCTCAAGGGAGAATTCTGTGACATCCAATGACTCATTGAGTTTTGATAACAACTCTACAGCTGCCGATTCAGTACAAACAACTTCTAATGATCCTATAGATGAAGATTTAATTGTGCAAACTGAGCGCTTAATTATTAATGAAAGTGATGCTGCATGCAAAGAAACAAAGGAGCAAACTTCAGACTATCAAATTCCAAAATGTGTTTTTAGTGAAGACCCACAAGATGAGTCTATATCTGGGGTGGAAACTGAAAGCTTTAAGTCTGCAAACGATGAAGCGGACATTGCTTCAGCAGAAACTGAGAGCAGTCCAAGCTCTAGTGTTGAAGCCTGTGGTAGTGATAAAATGCCACATCTTGGTCGTGCTTCAAGTTCAAATGATATAAGTGGATTTCCCTTCACATTTGCTGCCTCTTCCAATGCTGAAGCTCAATCATCTAGCCCAAAACGCCACCTCAAAAAGAAAAATTGGGTAAAAGTTGGTTATGATACTCACAGCTCCGCTCCAAGCTTGAAGGTTTCTTATTCATCCCCATCTATGTCATTTTCTACAACTTCATCTCTGTTCACCTCTGGGCATGGTCAGAAAGCCAAAGAATCCCCTCCTCGACCCAAAACAAGGGATTCTGAGATAAATAAGGAGCAGGGTATGAAGGAGGAGGCTGCTTCTACTACTGCTGCAACCATTGCAGCTCAAGAAGCCTGTGAAAAGTGGCGACTCAGGGGAAATCAAGCCTACAAAAATGGGGATCTACTTATGGCTGAGGATTGTTACACCAAAGGACTTAACTCTGTTTCTAAAGAAGGAACATCCAGGAGCTCTCTTAGGGCTTTGATGCTATGTTATAGCAATCGTGCTGCTACACGCATGTCTCTTGGAAGGATGAGAGATGCTCTTAAAGATTGTATACTGGCAGCTGAAATAGATCCAAGTTTCCTCAGGGTACAACTTAGAGCTGCAAATTGTTACCTTGCTTTGGGGGAGGTTGGAGATGCGTTGCAATATTTCAAGAGGTGCTTGCAATCAGGAAGTGATGTTTGTGTAGATCGAAAAATTGCTGTGGAAGCCTCTGATGGCTTACAAAAGGCACAGAAAGTATCAGAATTTATAAAAAATTCTGCTGAACTTTTGCGAACAAGGACAACCTCTGATGCAGATAGGGCATTGGAGCAAATTAACGAGGCATTGTTGATAAGTTCATACTCTGAAGAATTACTAGAAATGAAAGCAGAGGCTCTTTTCATGCTGGGTAAATTTGAGGAGGTGATTCAGCTCTGTGACCAGACCCTTGGTTCTGCTGAGAAGAATTCTCGTTCATCTGATGCTGAAGGTGAAGTCACAAATTTGGATGATTCAAAACTCCCAAAAGGCTTCTACTTCAGGTTGTGGCGGTGCTCAATGAAACTTAAAGCTTATTTTCACCTTGGAAAGCTTGAAGAGGGTCTTTCTTCACTGGAGGGACAAGGGGAAGTGCTGTCTTCCATGAACATGAGTGGAAGCAAGGTTTTTGACTCACTGATCCCACTAGCTGTCACTGTACGTGAACTTTTGCATCACAAGATTGCAGGGAATGAAGCATTTCAGGCAGGAAGATATTTAGAAGCTGTTGAACATTATACTGCTGCCTTATCATGCAATGTGGAGTCTCGTCTGTTTGCAGCAGTCTGTTTTTGTAATCGTGCTGCCGCATATAAAGCATTAGGTCAAATTACCGAGGCAATTACTGATTGCAGTCTGGCTATAGCCCTTGATGGAAATTATTTGAAGGCACTTTCTAGGCGTGCAACTCTGTATGAGATGATCAGAGACTATGCACAAGCAGCTAGTGATCTTCGGAGGTTTGTCTCTGTCCTCAACAAAGGGGTGGAGGATAAGGCCAATCAGCTTGGCATATCTGATAGATCTATTAGTTATGCTAATGATTTGAAACAAAATCGTATACGGCTTTCTGAAATGGAGGAGGAAGCTAGAAAGGAGATCCCTCTTGATATGTACCTCATATTGGGAGTTGAACCATCTGTTTCTACATCTGAAATCAAGAAGGCTTATCGGAAAGCTGCACTTAGACATCATCCTGACAAGGCTGGCCAATCTTTGGCAAGAAGTGACAATGGGGATGACGGGATATGGAAGGATATTGCTGAAGAAGTACGCAGAGATGCTGATAGGCTTTTCAAGATAATTGGAGAGGCCTATGCAGTGCTGTCAGACCCTGCCAAGCGTGCACGATACGACGCTGAAGAAGAAATGAGGAATGCTCAAAAGAAGCGCCAGGAAAGTGGCATGGCCAGAACTAGTGTTGATACCCAGTATTACCCATTTGAACGAAGCAGCGGTAGGAGCCATTGGAGAGATGCACGGAGACCATATGGTAACTCATCTTTTAGAGGTTCTCAACCTGGCCAGTCAGGCGGGTATTAA 4032 0.4271 MSPALVVPRAPVHTDDLTGRASHSISFDFSGFSPFGQFERHQRSPHDMEPSNAMDGASGISKSNAQNTNFTFSTSSASASASRPVSGLSRPRFMKVRKQSNAQSLRSTTGIEEIQVAPGFNPFCPVRDCSVRPFSGSGMGSSSIFSISDAGQTGNEPFIFGTKSSDSGSNLNMGNTGSGGNVDHEIIDRMRNLKMGNVNEVSNVKDMGYKKGEFAFECGHKKSSSHDGDFVSKLPEDISKLHTRGIDDNGKTKSGGLNTYADDCFKFTSGSKDNTSGSSYVESELQNELKKKLSFKESGAGDLHIDNSTNAVLNQLKNLNVKDSSGIDNVQKNEVDVMTGGKKKSASASSKTPSSYIGGRTESILSRKMEKLKVVSEKGDFTKPKFWNPSSQESVEEINQTDLSGDQVPSDKPKENIRMVQNAAPSSSFLSGGITFSMVENAFGGTKRDEFVFTGKKDDSGSSFVEFKTPASNKEQSSNRRMKKRRGKPKLSTPVLPLHGQDFVSMENVSEENSEASEAYSPMDVSPYQETRTETQCSRENSVTSNDSLSFDNNSTAADSVQTTSNDPIDEDLIVQTERLIINESDAACKETKEQTSDYQIPKCVFSEDPQDESISGVETESFKSANDEADIASAETESSPSSSVEACGSDKMPHLGRASSSNDISGFPFTFAASSNAEAQSSSPKRHLKKKNWVKVGYDTHSSAPSLKVSYSSPSMSFSTTSSLFTSGHGQKAKESPPRPKTRDSEINKEQGMKEEAASTTAATIAAQEACEKWRLRGNQAYKNGDLLMAEDCYTKGLNSVSKEGTSRSSLRALMLCYSNRAATRMSLGRMRDALKDCILAAEIDPSFLRVQLRAANCYLALGEVGDALQYFKRCLQSGSDVCVDRKIAVEASDGLQKAQKVSEFIKNSAELLRTRTTSDADRALEQINEALLISSYSEELLEMKAEALFMLGKFEEVIQLCDQTLGSAEKNSRSSDAEGEVTNLDDSKLPKGFYFRLWRCSMKLKAYFHLGKLEEGLSSLEGQGEVLSSMNMSGSKVFDSLIPLAVTVRELLHHKIAGNEAFQAGRYLEAVEHYTAALSCNVESRLFAAVCFCNRAAAYKALGQITEAITDCSLAIALDGNYLKALSRRATLYEMIRDYAQAASDLRRFVSVLNKGVEDKANQLGISDRSISYANDLKQNRIRLSEMEEEARKEIPLDMYLILGVEPSVSTSEIKKAYRKAALRHHPDKAGQSLARSDNGDDGIWKDIAEEVRRDADRLFKIIGEAYAVLSDPAKRARYDAEEEMRNAQKKRQESGMARTSVDTQYYPFERSSGRSHWRDARRPYGNSSFRGSQPGQSGGY 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2715 1343 SUPERFAMILY TPR-like 1055 1154 IPR011990 GO:0005515
Dere04g2715 1343 MobiDBLite consensus disorder prediction 462 569 - -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 385 407 - -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 385 412 - -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 332 358 - -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 632 647 - -
Dere04g2715 1343 Pfam DnaJ domain 1200 1282 IPR001623 -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 735 754 - -
Dere04g2715 1343 Gene3D Tetratricopeptide repeat domain 1052 1169 IPR011990 GO:0005515
Dere04g2715 1343 Gene3D Tetratricopeptide repeat domain 771 1031 IPR011990 GO:0005515
Dere04g2715 1343 MobiDBLite consensus disorder prediction 600 660 - -
Dere04g2715 1343 SMART tpr_5 850 883 IPR019734 GO:0005515
Dere04g2715 1343 SMART tpr_5 1053 1086 IPR019734 GO:0005515
Dere04g2715 1343 SMART tpr_5 1091 1124 IPR019734 GO:0005515
Dere04g2715 1343 SMART tpr_5 816 849 IPR019734 GO:0005515
Dere04g2715 1343 SMART tpr_5 772 805 IPR019734 GO:0005515
Dere04g2715 1343 SMART tpr_5 940 973 IPR019734 GO:0005515
Dere04g2715 1343 SMART tpr_5 1125 1158 IPR019734 GO:0005515
Dere04g2715 1343 Coils Coil 1276 1296 - -
Dere04g2715 1343 ProSitePatterns Nt-dnaJ domain signature. 1262 1281 IPR018253 -
Dere04g2715 1343 SUPERFAMILY TPR-like 773 966 IPR011990 GO:0005515
Dere04g2715 1343 PRINTS DnaJ domain signature 1202 1220 IPR001623 -
Dere04g2715 1343 PRINTS DnaJ domain signature 1220 1235 IPR001623 -
Dere04g2715 1343 PRINTS DnaJ domain signature 1257 1277 IPR001623 -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 38 69 - -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 722 758 - -
Dere04g2715 1343 CDD DnaJ 1200 1274 IPR001623 -
Dere04g2715 1343 SUPERFAMILY Chaperone J-domain 1164 1281 IPR036869 -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 506 569 - -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 343 358 - -
Dere04g2715 1343 Coils Coil 1176 1196 - -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 1282 1299 - -
Dere04g2715 1343 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 60 1331 - -
Dere04g2715 1343 SMART dnaj_3 1199 1277 IPR001623 -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 1329 1343 - -
Dere04g2715 1343 MobiDBLite consensus disorder prediction 1282 1343 - -
Dere04g2715 1343 ProSiteProfiles dnaJ domain profile. 1200 1285 IPR001623 -
Dere04g2715 1343 Gene3D DnaJ domain 1186 1307 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2715 Dere-ChrDere04 36739302 36767850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2715 1202 1283 C2H2 Transcription Factor Family AT1G74250 34.146 6.99e-06 48.5