Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2712 ATGGATGCAAGCAAGGAGGAGGAGGAGGCTCATAAAGTAATAGAAATTGCGGAGAAGCGATTTGCTCAGAGAGATTTTGCAGGTGCAAAAAATTATGCATTAATGGCTAAAGCCCTTTGTCCAGGAATGGAGGGTGTATCTCAAATGGTGGCTACATTTGAAGTTTACATTGCTTCTGAGATTAAAAATAATGGCGGAAGAGATTATTATTCCATTCTCGGATTAAAACCTTCAGCAGATGAAGAGAGCATCAAGAAACAGTACAGGAAGATGGCTGTGTTGCTTCACCCAGATAAGAACAAATGTGTAGGAGCTGATGGAGCATTTAAGCTTGTATCTGAAGCATGGACATGGCTTTCAGATAATGCTAAGCGTAGTTCTTATGATCTCAAGAGAAACACAAAATTATCTGCTGGGATTAATCAGACAAATTTATCTTCAGTCCATGCTACAGGGGCTACTGGTTATAATAAATGTTCCAATTTTTCAAGCTCTCATGGTAGACTTGACACTTTCTGGACGATTTGCACTTCTTGTAAGGTTCAGTATGAGTATCTACGCAAGTATGTGAATAAGAGACTTTCATGTAAGAACTGCCGTGGCACTTTCATTGCTGTTGAAACTGGGGCAGCCCCAGCAAATGGTTCATTCCCATACAGTCCTTGGTCATATCTGCCAGGCAACAATTATGGAAGCCATATTTTTGATGGAGTTACCTATGTCCCAACTAGTGCTGCCTATTTCAATGGAAATGGGGTCACAGGATATCATTCTGGACATGGATATGAGTATGTTCCAAATGTTTCATTTCAGTGGAACTCAACAGGACATGTCAGTCAAAATGGATCAACTGCCTTATCTGCTGGCTCTGTGTATCAGGCCAATGGAAAAGCGAAGAGAGGAAGACCTAAAATCAAATCAGGAACCGAGAGGAGTCACCATGCCGGAGAGACGCTTCTCAATAAAAATCCAGATGTGTCATACTCCAGTTATGATCCACAGGAAATTAAGCCCAGTAAGCCTGATAAGAAAAGAAAAGTTGTTGTGGAAGGTGTTTTCAGAAATAACTATGAAGAAAATGGATCCAAAGTTGCTCTAGAATCGAGAGTGGCCAATAGAAATGAAAACATTGGTTTTAGCTCAAAGCTTTCTTGTACAAGTGAAGTTCAACCTAAACAATGTTCCATGGAACTTGTATTTGATACTAGAAAATCATTGATTGACAAGGCCAGAAGAGAAATTAGAAGGAAACTGGAGGAGATGAAGTTGGAGACCAAACCAGCTGCTGCTGTTAAGGAGAAAGAACAAGCAAAAGCGGTAATCATTCAAGTCAAAAGTGATACATATAGAAGAGCAGGTCTGAATATTTCTGGTCTTCAACTAGAGCATAGGAAAGCTGGTCCAGTCTCAATAACAGTCCCAGATTCTGACTTTCATGACTTCGATAAAGATAGGTCAGAAGAATGCTTCAAGGCAAAGCAAATATGGGCCTTATATGATGAGGATGATGGGATGCCTCGTTTATATTGTCTCATCCGTGAAGTTATTTCCACAAATCCATTTAAGATTCATATAAGTTACTTAAGCTCCAAAACTGATAGTGAGTTTGGCTCAGTGAATTGGGTAGATTCAGGTTTTACCAAATCTTGTGGAAATTTTAGGGCCTGGAGCTCTGACATTGTTGAGCAAGTTAACATTTTTTCTCATGTTCTAAGCCGCGAGAAGGCTGGTCGAGGTGGATGTGTTCGTATATATCCTAGAATTGGGGATATTTGGGCTGTTTATCGAAACTGGTCACCAGATTGGAACAGATGTACACCAGATAAAGTGAGGCATCAGTATGAAATGGTGGAGATTCTTGATGAATATTCTGAGGAGTTTGGTGTTTGTGTGACTCCCCTTGTAAAGCTAGATGGATTCAAAACAGTATATCGGAGGAATACAGACAAAAGTGCTGTTAGATGGATACCAAGAAGAGAAATGTTGTGCCTCTCGCACCAAGTGCCATCATGGTTGCTTAAGGGAGAAGCAAGCAATTTGCCAGAAAGGTGTTGGGACCTCGATCCAGCTGCCACACCAGATGAGCTTCTTCATGCTGCAACATCCGAAGAAAATGCTTTGTAG 2124 0.4073 MDASKEEEEAHKVIEIAEKRFAQRDFAGAKNYALMAKALCPGMEGVSQMVATFEVYIASEIKNNGGRDYYSILGLKPSADEESIKKQYRKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDNAKRSSYDLKRNTKLSAGINQTNLSSVHATGATGYNKCSNFSSSHGRLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFIAVETGAAPANGSFPYSPWSYLPGNNYGSHIFDGVTYVPTSAAYFNGNGVTGYHSGHGYEYVPNVSFQWNSTGHVSQNGSTALSAGSVYQANGKAKRGRPKIKSGTERSHHAGETLLNKNPDVSYSSYDPQEIKPSKPDKKRKVVVEGVFRNNYEENGSKVALESRVANRNENIGFSSKLSCTSEVQPKQCSMELVFDTRKSLIDKARREIRRKLEEMKLETKPAAAVKEKEQAKAVIIQVKSDTYRRAGLNISGLQLEHRKAGPVSITVPDSDFHDFDKDRSEECFKAKQIWALYDEDDGMPRLYCLIREVISTNPFKIHISYLSSKTDSEFGSVNWVDSGFTKSCGNFRAWSSDIVEQVNIFSHVLSREKAGRGGCVRIYPRIGDIWAVYRNWSPDWNRCTPDKVRHQYEMVEILDEYSEEFGVCVTPLVKLDGFKTVYRRNTDKSAVRWIPRREMLCLSHQVPSWLLKGEASNLPERCWDLDPAATPDELLHAATSEENAL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2712 707 SMART dnaj_3 67 124 IPR001623 -
Dere04g2712 707 MobiDBLite consensus disorder prediction 303 318 - -
Dere04g2712 707 PRINTS DnaJ domain signature 104 124 IPR001623 -
Dere04g2712 707 PRINTS DnaJ domain signature 70 88 IPR001623 -
Dere04g2712 707 PRINTS DnaJ domain signature 88 103 IPR001623 -
Dere04g2712 707 PRINTS DnaJ domain signature 124 143 IPR001623 -
Dere04g2712 707 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Dere04g2712 707 CDD DnaJ 68 121 IPR001623 -
Dere04g2712 707 PANTHER BNAC03G44070D PROTEIN 1 693 - -
Dere04g2712 707 Gene3D DnaJ domain 57 153 IPR036869 -
Dere04g2712 707 MobiDBLite consensus disorder prediction 296 343 - -
Dere04g2712 707 Pfam DnaJ domain 68 129 IPR001623 -
Dere04g2712 707 Pfam Domain of unknown function (DUF3444) 470 676 IPR024593 -
Dere04g2712 707 SUPERFAMILY Chaperone J-domain 66 137 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2712 Dere-ChrDere04 36648261 36650384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2712 2 304 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.061 2.56e-32 127