Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2710 ATGTCGCAGCCAAACGATTCTTCAGGTTGTAACGAAAATGGCGACAGTATTGCTCTTGGTGCTTCCTTGCTCGGCACTGGTAGCAAGTACTCCCGGCTATGGCGGCGACCCTTATACATTCAAATCTTCGTCTCTCTCACGAAGGCATCAAGAACTTCGAGCAATGAACCTGAACAATCACCTCTCTCTTCTGAACCGTACACCCCATTACCCCCATCACCATCATCACCTGCTGAATCTTCGTGTCCGAGTGACATGCCCCTGGATAACGAAGAGGACGGAAATGTGCGTTTAGAACAGCGAATCAAGGACGATATTGCTCGTATTGTGAAGGAGAAGGACTTGGACATGCTTCTTGAGCTCGGTGGAGTCGACGGTGTTCGCTCAGTTCTTGGTCATCGTCAATCTGAGAAGGGCCATACTGCTTATGGGAACAACCAAGTCTTGGAGACCACTGAGCAAGTTCACGGGAGAAGCTTCTCATACTGTTTTAAGAACAGCTGCAAACGCAACAGTTGCACAATTTCATTACTCTTGATCTCAGCTTTGTTGTCCTTAGTCACAGAGATCAAGCAGGAAGGACCTAAATACGGTTGGCATGATAGTGTTGCCATAGTTGTTGCCCTTATCATGCTTGTTGCTTTCTCTTCAGTGGCAGACTTTCGGCGTGGAAAAAAGATGGGCGAGTTGAAAATCACTGTTGTTAGAGGCGAGAACTCCCAAATGGTAGCCATATCAGATATTATGGTCGGTGATATAGTGTGCCTGAAGAAGGGTGATGAGGTTCCAGCTGATGGTTTGTTTCTAAGTAATGTAAAGGATGAGGCACGGGAGCCATTTCTCTTGTCTGGTTCAAAAGTGTTGTTTGAGGGCCATCATTTGATGCTTGTAACATCAGTGAGAGACAAAATATCAGTTGAGATGCAGAACTCAGTGGCTAATGATCCTGAAAAGATTACACTGCTGGATAGTCGAATTGAGAAGCTGATTTCTTACTTTGACAATGTTGCTCTTCTTATATCTACATTGGTTGCATTTGTGGTGCTCATTCGCCTATTCTGCAAGAAAAAAGGGGACAATTATGAGTTACCTGAAATTAAGGGTAAGGTTTCAGTTGGCTTCCTGATGGAATTGCTTGAGAGAATTTTCTTGAAACCGCAAGGAAAAGTTTCCATCTTAACGAGTGTTATTACTGTTGTAGTAATGGGTATGCGGCATATGGTGCCACTTATGGTTACAATTTCCCTCAACCATCAGATTGATAAGGTGGTATCAAACCAAGTAGCGGATCTTCATGATTTATCGGCTTGTGCAACAATGGGGCTAGTTACTGTTATCTGCATTGATGCATCTGTTGAGCTGTTAAGCTGTAAACTGATGGAGGTTAGGAGAATCTGGACTGGGGAGAGAGATATCAGCAATGATGTGAAATCAGGAACTAATCCGGTTGTACTCAAAGCCCTTCAGCAAGGAGTCAAAGTATCTGTTCTTGCTCCGAAGCTTTCTCCAGTTTCCAATTCACTTATTTCTTGGGCAGAAGCAACATGGGGAGTGAACAGGGACTCTTTTGGTCACGATCTTACCATTCTTGAACACAGTGAACAGAATTCTCCTGAAGAAGGAAGTGGAGTTTTAGTGAGAAAAGTTGGAGACGGTGAACAAGTTCTGCACTTGCACTGGAGTGGTAAAGCAAACACAATATTGGACATGTGTTCACAATACTATGATAGTAATGGGGAATGCCAGAACATGGAAAATCAGAAAACCCAATGTGGGCAGGTGATTAGGGATATGGAGGATAGTGGCCTTGAGCCTATTGCGCTTGCTTATCGACAAACAGAGACGCAAGAACTTAAGCGAGATGGCTTAATCTTGCTAGCACTGATAGGTCTTAAAGACACATGTTCGGAAGAGACAAAAGCAGCATTAGAAGGCCTTAAGAAAGATGGAATAAAGATAAAATTAGTGTCAAGACATGATATCACGGCATTGAGAGCCATAGCTTGTGAACTAGGAATTGAAATTCCACTTGAAGAAGGTGTTATTCTTGAAGGAAAAGAAATTAAGAAATTGAATAGCACTGCAAGATCGGAGAAGTTGGATGAAGCCCTTGTAATGGGAGGTTTCCTTCCTGAGGACAAGGTTCTCATGGTTCGGTGCTTGCAAGATGTAGGTCATGTGGTTACATTCTTTGGAGGGTTGACAGCAAGTGATACTGCAGTCCTAAAGGCAGCTGATATAGGGATAGCTGATTATTCTTTGACCCCAATAACATGTAGAGAGTACTCCAATATATCTATCAAACGTTTCAGTGCAATAACCACAATTGTGAGGGCTGGTAGACATCAATATCACAAAATGCAGAAGTTCATTCAAATTCAGCTCACAGCTGGCATATCTGGGTTACTCATAACCTTGATTACAACAATTTGTATTGGAGAATCCCCTCTAACAGCTTTCCAACTGATTTGGGTGAATATGATAATGTGCCTCTTGGGTGGCCCAATGATGGTAATGGAACTCAAGACCAAGGAGGAACAGCACGCCAGCCAACCATATGGCCGAAAGCAGTTGCTTATAACCCTCGAAATCTGGAAAGAGATAGCTATTCATGTTTTGTATCAGGCTTCTGTATCCATGATATTTCAATTTGGGGGACAAGTCGCAGACAGCAGAGAACAAGTGAGGAAAACTATGATCTTCAACACATTCATGCTATGTCAGGTTTTCAATCAACTCAACAGAATGCTGTCACTGAAGAAGGAGGTTTTCCAAAAAGTTCTTTGGAGCTTCTATTTCTTGGTGGCTTTAGGGGTTTGTTTGATTATGCAGGTCCTGGTGATTCAATATGCAAATTGCCTGGCAGATTGCACGAGGCTGAATGCTAGTCAGTGGGTTATCTGTATCCTGGTTAGTGCTCATTCATGGATATTTGAATTGTTATTGAAGTTTCTTCCAGAACCACCACCAAATAGTAAGAAAGAAGAAGACTAA 2994 0.4279 MSQPNDSSGCNENGDSIALGASLLGTGSKYSRLWRRPLYIQIFVSLTKASRTSSNEPEQSPLSSEPYTPLPPSPSSPAESSCPSDMPLDNEEDGNVRLEQRIKDDIARIVKEKDLDMLLELGGVDGVRSVLGHRQSEKGHTAYGNNQVLETTEQVHGRSFSYCFKNSCKRNSCTISLLLISALLSLVTEIKQEGPKYGWHDSVAIVVALIMLVAFSSVADFRRGKKMGELKITVVRGENSQMVAISDIMVGDIVCLKKGDEVPADGLFLSNVKDEAREPFLLSGSKVLFEGHHLMLVTSVRDKISVEMQNSVANDPEKITLLDSRIEKLISYFDNVALLISTLVAFVVLIRLFCKKKGDNYELPEIKGKVSVGFLMELLERIFLKPQGKVSILTSVITVVVMGMRHMVPLMVTISLNHQIDKVVSNQVADLHDLSACATMGLVTVICIDASVELLSCKLMEVRRIWTGERDISNDVKSGTNPVVLKALQQGVKVSVLAPKLSPVSNSLISWAEATWGVNRDSFGHDLTILEHSEQNSPEEGSGVLVRKVGDGEQVLHLHWSGKANTILDMCSQYYDSNGECQNMENQKTQCGQVIRDMEDSGLEPIALAYRQTETQELKRDGLILLALIGLKDTCSEETKAALEGLKKDGIKIKLVSRHDITALRAIACELGIEIPLEEGVILEGKEIKKLNSTARSEKLDEALVMGGFLPEDKVLMVRCLQDVGHVVTFFGGLTASDTAVLKAADIGIADYSLTPITCREYSNISIKRFSAITTIVRAGRHQYHKMQKFIQIQLTAGISGLLITLITTICIGESPLTAFQLIWVNMIMCLLGGPMMVMELKTKEEQHASQPYGRKQLLITLEIWKEIAIHVLYQASVSMIFQFGGQVADSREQVRKTMIFNTFMLCQVFNQLNRMLSLKKEVFQKVLWSFYFLVALGVCLIMQVLVIQYANCLADCTRLNASQWVICILVSAHSWIFELLLKFLPEPPPNSKKEED 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2710 997 Gene3D - 272 462 - -
Dere04g2710 997 Gene3D - 175 225 - -
Dere04g2710 997 MobiDBLite consensus disorder prediction 49 63 - -
Dere04g2710 997 SUPERFAMILY HAD-like 624 752 IPR036412 -
Dere04g2710 997 PANTHER CATION TRANSPORTING ATPASE 103 987 - -
Dere04g2710 997 SUPERFAMILY Calcium ATPase, transduction domain A 231 300 IPR008250 -
Dere04g2710 997 Pfam Cation transporting ATPase, C-terminus 815 985 IPR006068 -
Dere04g2710 997 MobiDBLite consensus disorder prediction 49 96 - -
Dere04g2710 997 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 986 IPR023298 -
Dere04g2710 997 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 549 635 IPR023299 GO:0000166
Dere04g2710 997 Gene3D - 463 629 IPR023299 GO:0000166
Dere04g2710 997 Gene3D - 226 267 - -
Dere04g2710 997 Gene3D - 764 989 - -
Dere04g2710 997 Gene3D - 630 758 IPR023214 -
Dere04g2710 997 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2710 Dere-ChrDere04 36606516 36619937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2710 29 986 Primary Pumps ATPases AT3G63380 31.946 6.81e-133 425