Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2697 ATGCAAGCATCAGAACATCATAGAAGTTCATCAATGTACCACCAACCGATGCAGCAAACCAATTCCTACTGCTTGCCGCAGTATCAAACCTTAAATCATCAGCTATACTACAAAGATATAGGAGGCCATGGAACCCACTTATCTACTCTTAGTTCTTCTGAACTTTACTGCACATTGGAGTCATCCTCTGCAACTGGAAGTTTCAATGTTCATAACTCCCCTTCAACTGTGACTTTCTCTCCAAATGGCAGCCCGATCTCACAGCAAGATTCTCAGTCATACTCGTACCCACCTGATCAGCATCATTCCCCTGACAATACTTATGGCTCTTCGATAAGCGGGTCCTGTGTAACCGAAGATTTACATAACTTGAAGCACAAGTTGAGAGAGTTGGAAAGTGTAATGTTTGGCCCTGACTCTGATAATCTTGACAGTTATGACAGCACCTTCAAGGATGGAACTAACTTTCTTTCGCCTGAGATGGATGGCTGGAGACAAACACTGGTGGAGATTTCTAGTAAGGACCTGAAACAGGTCCTAGTTGCGTGTGCAAAAGCAGTTGCTGATAATGATTTGTTAATGGCTCAATGGTTGATGGATGAATTACGCCAAACGGTGTCAGTTTCTGGTGAACCAATTCAAAGGTTGGGAGCGTACATGTTGGAAGGGCTAGTGGCTCGTTTGTCTGCCTCTGGGAGTTCAATCTACAAGGCTTTGAGATGCAAAGAACCAGCAAGTGCTGAGCTCCTCTCGTACATGCACATACTTTACGAGGTCTGCCCCTACTTCAAATTTGGATACATGTCTGCAAATGGAGCCATTGCTGAAGCTATGAAAAATGAAGACAGAGTTCACATTATAGATTTCCAAATAGCTCAAGGAAGTCAATGGATCACCTTGATTCAGGCTTTTGCAGCTAGGCCTGGGGGACCACCCCACATCCGAATTACAGGTATAGATGATTCAACATCAGCTTATGCCCGTGGAGGAGGACTAAACATAGTGGGAAAGAGGCTATCAAAGCTGGCTGAGAAATTCAAGGTGCCATTTGAATTTCATGCTGCTGCTATCTCCGGCTGTGATTGTAAGCTGCATAATCTTGGGGTTCGACCTGGGGAGGCCCTGGCTGTGAATTTTGCATTCATGTTACATCACATGCCTGACGAAAGTGTCAGCACCGAGAATCACAGGGATCGACTGTTGCGCTTGGTGAAGAGCTTATCTCCAAAGGTGGTGACTCTCGTTGAGCAAGAATCGAATACAAACACTGCACCATTCCTCCCACGTTTCCTGGAAACTCTGGACTACTACAAAGCTATGTTTGAGTCAATCGATGTGACTCTTCCCAGAGAGCACAAAGAGAGAATCAATGTGGAGCAGCATTGCTTGGCGAGGGACGTTGTTAACATCATAGCTTGTGAAGGGATGGAGAGAGTGGAAAGGCACGAGGTGATGGGGAAGTGGAGATCCAGATTTGCAATGGCTGGTTTCACACCTTACCCTTTGAGCTCATTGGTGAATGGTACCATCAAGAAACTGCTTGAGAATTATTGTGATAGATATGCACTTGAAGAGAGAGATGGGGCTCTCTATCTTGGATGGATGAATAGAGATTTGGTTGCTTCTTGTGCATGGAAGTGA 1641 0.4516 MQASEHHRSSSMYHQPMQQTNSYCLPQYQTLNHQLYYKDIGGHGTHLSTLSSSELYCTLESSSATGSFNVHNSPSTVTFSPNGSPISQQDSQSYSYPPDQHHSPDNTYGSSISGSCVTEDLHNLKHKLRELESVMFGPDSDNLDSYDSTFKDGTNFLSPEMDGWRQTLVEISSKDLKQVLVACAKAVADNDLLMAQWLMDELRQTVSVSGEPIQRLGAYMLEGLVARLSASGSSIYKALRCKEPASAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKNEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLNIVGKRLSKLAEKFKVPFEFHAAAISGCDCKLHNLGVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFLPRFLETLDYYKAMFESIDVTLPREHKERINVEQHCLARDVVNIIACEGMERVERHEVMGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYCDRYALEERDGALYLGWMNRDLVASCAWK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2697 546 MobiDBLite consensus disorder prediction 75 112 - -
Dere04g2697 546 Pfam GRAS domain family 176 546 IPR005202 -
Dere04g2697 546 ProSiteProfiles GRAS family profile. 167 546 IPR005202 -
Dere04g2697 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 540 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2697 Dere-ChrDere04 36459043 36460683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2697 114 546 GRAS Transcription Factor Family AT5G48150 77.221 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere04g2697 GRAS 2.2e-138 CL0063