Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2696 ATGGTTTCTTCAGACCAAAGTGCCGATCACAATATTTCTTCTGATAAATTGCATCAGAGGTCAAGTTCTAATAGCGATATTACATTGTCACAAGAGACTTATGATAATAAAATTGATTCATCCAAACCAGATGGAGCAAGATGCATTCCTTCTGTTGTAGCTGAAAAAGAAGCACAAGATTCTGATGCTACTGCCGATGCACTGCAATCAGATCAAGAAGGAAGTGCTTGTACTTCACCACTTCAGAGACCTTTGCAGAGCCCTACTACTGATTTGCGTCCATTACAATCCAGTCAGGAAAGTCCCTCTATAATACGCAAAAAGGGCTCAAAGGATACTGTAGCTGGAAAAGAAGTGTTGGATTCTGATGCAGATCCAGGGCAATCAGATAAAAAAAGTACATGCTCTTTAAAACATGAGAAACCTTTGCAGAACCCTAATACTGTTCCGCGTGCATTACAATCTGGTCAGGACAGTCCCTCTATAATACGTGAAAAGGTCTCTAAGGATGGATATAATTGGCGAAAATATGGCCAGAAAAATGTTAAGGGTAATGAATTTATAAGGAGCTATTACAAGTGCACACATCCCAACTGCCAGGCAAAGAAGCAATTGGAGCAGTCAAACAATGGGCAGATTACAGATACCATTTGCATTGGTCAGCATAATCATCCTCAAGTGAACACCCCACTACCTGTTGACTCTGCTGTGATTGCTATTGATGAAAGATCAGACAAGCCCTCTCTAGTTAATGTGGAAGACAAAGCATCCATTGAGCATGGATGTGTGCCTCAACAGATCAAGCCTTTAGAAGCTCATCCAATTTCAACAGTTTCAGCAAGTAATGAGGCGAAAGCTGCACATATACAATCAAATAGAACAAGGGATGTGGTTCTTACAACTGAGGATCCTGAATCAAAACGACTGAAGAAAAACAATAGTAATGTTGATGTCACTGGGGTTGAGAAGTCAACTGGTGAATCTCGTGTTGTCGTTCAAACTTCCAGTGAGGTTGATTTTATTAATGATGGGTACCGTTGGCGCAAGTACGGGCAGAAACTAGTAAAAGGAAATCCAAATCCTAGAAGTTATTATCGCTGCTCGAATCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATCAGAAAATTGTAATAACTACCTATGAGGGACATCATGATCATGAAAGTCCCTCTGGAAGGACCATTGCTCGTAATGGAGCTGCAATAACTCCTGCGACAAATATCAACAGTGATTCAGGAACCAAATCTCAGGGAAACTCTGTTTGTGTTAGTATGACAGAACCCACCTGCTTGGACTCAGAAAGCAGATCAAACGAGCAACCAAATGGTGAGAAAATTGCTAAACCAAAGTCTGTTGATATGGTTGAATCTCCGGCCATCACCAAGCCTAATCAGGTTCCTGAAAGTACATCAAGTGACAAAGAACAAAAAGGCAACTCGGGTACTGAAAAAGATTGTATTGGCCATGGCACCACATGCCATTCAGGTTCTGAGCTTCCATGTAGATTAAATGAGAGGCAGAAAGATGAGGTAAGAACCATATCAGAAGATAGTAAGAATGAAGTAAATTAG 1605 0.4112 MVSSDQSADHNISSDKLHQRSSSNSDITLSQETYDNKIDSSKPDGARCIPSVVAEKEAQDSDATADALQSDQEGSACTSPLQRPLQSPTTDLRPLQSSQESPSIIRKKGSKDTVAGKEVLDSDADPGQSDKKSTCSLKHEKPLQNPNTVPRALQSGQDSPSIIREKVSKDGYNWRKYGQKNVKGNEFIRSYYKCTHPNCQAKKQLEQSNNGQITDTICIGQHNHPQVNTPLPVDSAVIAIDERSDKPSLVNVEDKASIEHGCVPQQIKPLEAHPISTVSASNEAKAAHIQSNRTRDVVLTTEDPESKRLKKNNSNVDVTGVEKSTGESRVVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDQKIVITTYEGHHDHESPSGRTIARNGAAITPATNINSDSGTKSQGNSVCVSMTEPTCLDSESRSNEQPNGEKIAKPKSVDMVESPAITKPNQVPESTSSDKEQKGNSGTEKDCIGHGTTCHSGSELPCRLNERQKDEVRTISEDSKNEVN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2696 534 SMART WRKY_cls 341 400 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 SMART WRKY_cls 168 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 ProSiteProfiles WRKY domain profile. 336 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 Pfam WRKY DNA -binding domain 342 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 Pfam WRKY DNA -binding domain 169 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 SUPERFAMILY WRKY DNA-binding domain 164 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 MobiDBLite consensus disorder prediction 439 534 - -
Dere04g2696 534 MobiDBLite consensus disorder prediction 17 36 - -
Dere04g2696 534 Gene3D WRKY domain 328 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 ProSiteProfiles WRKY domain profile. 163 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 MobiDBLite consensus disorder prediction 512 534 - -
Dere04g2696 534 FunFam WRKY transcription factor 57 327 401 - -
Dere04g2696 534 MobiDBLite consensus disorder prediction 105 138 - -
Dere04g2696 534 Gene3D WRKY domain 160 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 MobiDBLite consensus disorder prediction 1 164 - -
Dere04g2696 534 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 104 427 IPR044810 GO:0003700
Dere04g2696 534 MobiDBLite consensus disorder prediction 139 162 - -
Dere04g2696 534 MobiDBLite consensus disorder prediction 473 487 - -
Dere04g2696 534 MobiDBLite consensus disorder prediction 63 104 - -
Dere04g2696 534 SUPERFAMILY WRKY DNA-binding domain 333 401 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2696 534 FunFam WRKY transcription factor 157 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2696 Dere-ChrDere04 36445003 36448770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2696 152 454 WRKY Transcription Factor Family AT2G04880 47.249 2.23e-85 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere04g2696 WRKY 2.3e-25 CL0274