Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2692 ATGCTAGCTGAGGACTCGAATTCAAACACATCTAATCAAGATGTAGAACCATTTGCTGAAGTTGACCCAACTGGTAGGTTCGGGCGATACAGCGATCTGCTTGGCAGTGGTGCTGTGAAAAAGGTTTATAGGGCTTTTGATCAAGAGGAAGGCATAGAGGTGGCCTGGAATCAGGTTCGACTGAGGAATTTCAGTGAAGACCCTGTGGTATTGAACCGTCTTCATTCTGAGGTTGAGCTTCTTAGAACATTGAAGAACAAATATATAATTGTCTGTTATAGTGTCTGGAAAGATGATGAGCGGAACACTTTAAATTTTATTACTGAGGTATGCACTTCCGGGAATCTGAGGGCTTACAGGAAGAAGCATCGTCATGTGTCCACTAAGGCATTGAAGAAATGGTCAAAACAAGTCCTTGAGGGATTGGAGTATCTTCATACACATGACCCATGCATCATTCACAGAGATCTTAATTGCAGTAACATCTTCATCAATGGGAACATTGGCCAGGTGAAAATCGGTGATCTTGGATTGGCGGCTATTGTGGGAAGGAGCCATGCAGCACATTCAATTATAGGCACGCCAGAATTTATGGCTCCAGAGCTGTATGAGGAAGATTACACTGAAATGGTGGACATATACTCCTTTGGAATGTGTTTGCTAGAGATGGTTACGATGGAGATACCATACAGTGAATGTGACAGTGTAGCCAAGATATACAAGAAGGTAACAATGGGAATAAAGCCTCAGTCTTTAGACAACGTCACCGATCCAGAGGTGAAGGAATTCATTGAAAAGTGCATAGCACAACCAAGGGCAAGACCTTCAGCCTCGGAGCTCCTTAACGATCCTTTCTTTTCTGAACTCGACAATGACAAAGAACCAGATCCAGACCCAGCCAGTTAA 906 0.4338 MLAEDSNSNTSNQDVEPFAEVDPTGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVVLNRLHSEVELLRTLKNKYIIVCYSVWKDDERNTLNFITEVCTSGNLRAYRKKHRHVSTKALKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFINGNIGQVKIGDLGLAAIVGRSHAAHSIIGTPEFMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGIKPQSLDNVTDPEVKEFIEKCIAQPRARPSASELLNDPFFSELDNDKEPDPDPAS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2692 301 MobiDBLite consensus disorder prediction 1 20 - -
Dere04g2692 301 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2692 301 CDD STKc_WNK 26 286 - -
Dere04g2692 301 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2692 301 MobiDBLite consensus disorder prediction 286 301 - -
Dere04g2692 301 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Dere04g2692 301 MobiDBLite consensus disorder prediction 273 301 - -
Dere04g2692 301 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Dere04g2692 301 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 288 - -
Dere04g2692 301 Gene3D Transferase(Phosphotransferase) domain 1 111 292 - -
Dere04g2692 301 MobiDBLite consensus disorder prediction 1 17 - -
Dere04g2692 301 FunFam Probable serine/threonine-protein kinase WNK1 12 109 - -
Dere04g2692 301 FunFam probable serine/threonine-protein kinase WNK9 111 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2692 Dere-ChrDere04 36413361 36414576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2692 3 286 MAP Kinase Kinase Kinase AT5G55560 76.761 3.21e-173 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere04g2692 Pkinase 1.6e-51 CL0016