Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2606 ATGGAATTGGCCAAAAAGCCACTAAGCTGTTTGAAGGCGAAGCCCTGTTGTATCAACAAATGTCTTTGCGTGTCTCCTATGTGTCTCATGTGTGCCATTGAACTTGGAATACCAGACGTAATCTACAAGCATGGCCAATCCATTCCTCTTTCCCAGTTGGTGTTAGCTCTCGAAGTTCCACCAGCTAAAGCCACTTTTGTGCAGGGGCTGATGAGCTTTTGCATTACTTGGGGAAATGGGTTCGTGGGAAGGGATCTCACACTACCAGAGACCACATCTGGGGTTGGCTTCTGGGATGTCCTTAATCAAAACCCTGCAGATAAGGCAACCTTCCATGAAGCAATGGCAAGTGATTCTGTATTCGTAAACATGGCACTAAGAGACTTGGACTCAGTTTTCAAGGGACTGAGTTCTGTCGTTGATGTTGGTGGTGGAACTGGGACCACTGCTAAGATTATCTGTGAAGCATTTCCCAGACTGAAATGCACAGTGCTTGACCTTCCTGAGGTTGTAGAAAACTTATCAGGAAACATCAATTTGAGTTATGTTAGTGGGGACATGTTCAAATCCATCCCTCACGCTGACGCAGTTCTGCTTAAGTGGGTTCTACACAACTGGAGTGATGATGATTGCATCAAGATACTTAAAAATGCCAAAGAAGCTATATCAGGCAAGCCCAATGGAGGAAAAGTGATCATCATAGATATAGTGATGAATGAAAAGCAAGACGGACATCAACTGATGGAAACAAAGCTCCTCTTCCACACTTTTATGATGGCTGTATTTAATGCAAAAGAGAGAACTGAAGAAGAATGGAAGCAACTCTTCCTGAAAGCAGGCTTCACAGATTACCAGATATTCCCCATCTTTGGCTTTAGGTCTCTTATTGTGCTTCATCCTTAG 903 0.4374 MELAKKPLSCLKAKPCCINKCLCVSPMCLMCAIELGIPDVIYKHGQSIPLSQLVLALEVPPAKATFVQGLMSFCITWGNGFVGRDLTLPETTSGVGFWDVLNQNPADKATFHEAMASDSVFVNMALRDLDSVFKGLSSVVDVGGGTGTTAKIICEAFPRLKCTVLDLPEVVENLSGNINLSYVSGDMFKSIPHADAVLLKWVLHNWSDDDCIKILKNAKEAISGKPNGGKVIIIDIVMNEKQDGHQLMETKLLFHTFMMAVFNAKERTEEEWKQLFLKAGFTDYQIFPIFGFRSLIVLHP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2606 300 PANTHER O-METHYLTRANSFERASE 25 76 IPR016461 GO:0008168
Dere04g2606 300 Pfam O-methyltransferase domain 91 281 IPR001077 GO:0008171
Dere04g2606 300 SUPERFAMILY "Winged helix" DNA-binding domain 24 78 IPR036390 -
Dere04g2606 300 Gene3D Vaccinia Virus protein VP39 77 300 IPR029063 -
Dere04g2606 300 PIRSF O-mtase 82 300 IPR016461 GO:0008168
Dere04g2606 300 PIRSF O-mtase 11 78 IPR016461 GO:0008168
Dere04g2606 300 FunFam O-methyltransferase ZRP4 50 300 - -
Dere04g2606 300 Pfam Dimerisation domain 27 72 IPR012967 GO:0046983
Dere04g2606 300 CDD AdoMet_MTases 139 238 - -
Dere04g2606 300 Gene3D - 10 76 IPR036388 -
Dere04g2606 300 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 300 IPR016461 GO:0008168
Dere04g2606 300 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 297 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2606 Dere-ChrDere04 34485144 34486681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2606 94 286 Monolignol Biosynthesis Gene Families AT5G54160 35.204 4.22e-35 128