Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2588 ATGCCTTCTCTATATTCAAGGTCTTGTAAAGAGAGCTACAAGAGCGGTTACATGTGGTGCAACATAGACGTGGATGAAACCGACAGAAAGTACAAAAAGAAGAGGAAGAGGATGATCAACAAGAGGGCTTTAATGGAATGGAATTTGTTCCTCGCCATCATGACTTGCCTGAAAGTACTGTATTGCGTGTACAATCTTCAAAAGAGTGTTCAAAACTACGTATGGCTAGGCCTAGTGTTGGTGGCATGGATGATTATGTTCCATGACATCTATAAACACAACAAAGTGCTCAAGAAGTTCTTCAGGGCTCTCATGGTCATCCTGATTGGTGCAACCATTTGGCTGTTGAAAGTAATATTAGTGAAGGTTCTTGCATCATTGTTCCATGGGATGACTTTCTTTGATAGGATGAAAGAGAGCATTTTTCATCACTATGTGTTGGAGGCACTGTCGAGACCACCATTGGAAGAGGTAGAGATGGAGCGGACACAGCGACACTTACAGGCATCAAAGTCATTGCTAGCTAGGTTAAGGTATAGGAAGTCTAGGCCGTTGTCAAGGTCAAAGAAAGGAGATCGAGCCAAGGAGAAGGAGTGA 597 0.4305 MPSLYSRSCKESYKSGYMWCNIDVDETDRKYKKKRKRMINKRALMEWNLFLAIMTCLKVLYCVYNLQKSVQNYVWLGLVLVAWMIMFHDIYKHNKVLKKFFRALMVILIGATIWLLKVILVKVLASLFHGMTFFDRMKESIFHHYVLEALSRPPLEEVEMERTQRHLQASKSLLARLRYRKSRPLSRSKKGDRAKEKE 198
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2588 198 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 57 176 IPR016688 -
Dere04g2588 198 MobiDBLite consensus disorder prediction 171 198 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere04g2588 Dere-ChrDere04 34123598 34124358 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2588 58 161 Mechanosensitive Ion Channel Family AT1G53470 49.533 3.16e-27 106