Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2581 ATGGCAAAAGTGGCTGGTATTGAGGAAGCTGCTGAGACACCAGGTTTACATCCACGACCTCCCGATGCACCGCATAATACAGAAGCCAAAGAGGTGGCCCCTATTAAGTATTCCGTTGCTAGTAGGCGTGGGGTTGGGACTGCAGGAAAACGCATGCCATTGCTTGCCAATCATTTCCAAGTTTCTGTTAATGTTCCAGATGCTATATTTTTCCAGTACAGTGTTTCTATTACTTCAGAATATGATAAAGCTGTTGAAAGCAAGGGCATTAGGAGAAAGCTGGTTGATAGGCTTTACCAAACCTACTCTTCTGAACTCGGTGGCAAAAGATTTGCCTATGATGGAGAGAGAACTTTGTACACAGTGGGTCCTCTGCCACTTAAATTTTTTGAGTTTACAGTAGTGCTTGAAGAATCATTAGCAAAACGTAGTACTGGGAGTCCTGGTGCTGATGGAAGCCACAGTGAGGGAGCTAAAAGGTCAAAACATTCTCTTCAGTCAAAGACTTTTAAGGTAGAGATAAGTTTTACCACCAAAGTACCCCTGCAATCCATTGCTCTTGCCCTGGAGGGAGTTGAGTCAGATTCTAACGCTCAAAATTCTTTGAGAGTGCTTGACGTTGTACTGAGGCAACAAGCAGCTAGAATGGGGTGTCTCTTGGTAGGGCAATCATTCTTTCATGATGATTTGAAGAATTTCACTGATGTTGGAGGTGGAGTAACAGGAGTTCGGGGTTTTCATTCCAGCTTTCATCCTACACAGGGTGGATTGTCTCTCAATATGGATGTGTCCACGACATTGATCTTAACTCCTGGACCTGTAATTGGTTTTCTCCTATCCAACCAGAATGTGAGGGAACCCCGTTATATTGACTGGGCAAAGGCCAAGAAAATGCTTAAAAATTTAAGGGTGCGTGCAACACATCGCAACCAGGAATTTAAAATTATTGGCTTGAGTGAGAAACCCTGCAATCAGCAATTTTTTAGTATGAGGGTGAAAAATGGTGATAGCAGTAATGGAGGGCAGACAACAGATATTACTGTTTACGAGTATTTTGTTAAACACTGTGGTATAGAACTGGCGTCTGCATATCTTCCTTGTCTTGATGTGGGGAAGCCAAAACGGCCCATTTATCTGCCCATGGAGCTGTGTTCACTTGTTTCCCTTCAGCGTTATACAAAGGCATTGTCTCCAATGCAGAGAGCTTCTTTAGTTGAGAAATCACGACAAAAGCCTCAAGATAGAATTAAAACTCTGACAAATGCTCTGGCAAATTATCAATATGATGATGATCCTGTTCTTGCTGCATGTGGCATTTCTATTGAGAAGCAAATTACAAAAGTTCAAGGTCGTGTTCTTGAGACTCCAAAATTGAGGGTTGGTAAGAATGACGACTTCTTCCCTCATAATGGACGGTGGAATTTTAATAACAAGACACTTCTACAGCCAACTCATATTGGTCTATGGGCTGTCGTCAACTTTTCTGCTCGTTGTGATACTAGTTTCATTTCAAGGGAGCTTATCAAATGTGGAATGAACAAGGGAATTCACATTGAACGCCCATATACATTAATAGAGGAAGAATCACAAATGAGAAGATCTAGCCCTGTTGCAAGGGTTGAGAAGATGTTTGAGCTGCTATACGCAAAGGTTCCAGATGAGCCAAACTTAATTCTGTGCGTCTTGCCTGAGAGGAAAAATTGTGACATTTACGGACCTTGGAAGAAGAAATGTCTGAGTGAAGTTGGTGTTGTCACCCAATGCATTTCCCCTTTCAAGATCAATGATCAATACCTTACTAACGTGCTTCTAAAAATCAATTCTAAGCTTGGAGGAATCAATTCCTTGTTGGCCATAGAGCATTCTGGGCATCTTCCCCTGATAAAAGACATTCCAACACTGATTTTAGGGATGGATGTCTCTCATGGTTCCCCTGGTCGACCAGAAGTGCCATCAATAGCTGCAGTTGCTGGATCTCGATGTTGGCCACTAATTTCAAGGTATAGAGCATCTGTGAGAACGCAGTCATCTAAGGTGGAAATTATTGATACTCTATACAAGCCTTTGGCTGATGGGAAAGATGATGGCATCATCAGAGAACTGCTTTTGGATTTCTATCATTCAAGTAAGGGACGAAAACCAACTCAAATTATTGTCTTCAGGGATGGAGTTAGTGAATCACAGTTCAATCAGGTTTTGAACATTGAGCTGGACCAGATAGTTAAGGCTTATCAACATCTTGGAGATGTTGATGTTCCCAAGTTCACAGTAATTGTGGCGCAAAAGAATCACCATACAAGGCTGTTTCAAGCTAATGGGCCAGAAAACGTCCCTCCTGGGACAGTTGTTGACACAAAAATCGTGCATCCAAGGAATTATGATTTCTACATGTGCGCCCATGCAGGGATGCTTGGCACTTCTAGGCCAGCACATTACCATGTGTTACTTGATGAGATTGGTTTCTCAGCGGACGGCTTACAAAATTTAATCCATTCACTGTCTTACGTGTACCAGAGGAGTACAACTGCAACTTCAATTGTGGCACCCATACGCTATGCCCACCTTGCTGCCGCTCAGATGGGGCAATTTTTGAAGTATGATGATTTATCAGAGACATCTTCAAGCTTCACAACAGCGGTAGATGCCCCTGTACCAGAGCTTCCAAGGTTGCATTCAAATGTTCAGAGTAGCATGTTCTTCTGTTGA 2706 0.4257 MAKVAGIEEAAETPGLHPRPPDAPHNTEAKEVAPIKYSVASRRGVGTAGKRMPLLANHFQVSVNVPDAIFFQYSVSITSEYDKAVESKGIRRKLVDRLYQTYSSELGGKRFAYDGERTLYTVGPLPLKFFEFTVVLEESLAKRSTGSPGADGSHSEGAKRSKHSLQSKTFKVEISFTTKVPLQSIALALEGVESDSNAQNSLRVLDVVLRQQAARMGCLLVGQSFFHDDLKNFTDVGGGVTGVRGFHSSFHPTQGGLSLNMDVSTTLILTPGPVIGFLLSNQNVREPRYIDWAKAKKMLKNLRVRATHRNQEFKIIGLSEKPCNQQFFSMRVKNGDSSNGGQTTDITVYEYFVKHCGIELASAYLPCLDVGKPKRPIYLPMELCSLVSLQRYTKALSPMQRASLVEKSRQKPQDRIKTLTNALANYQYDDDPVLAACGISIEKQITKVQGRVLETPKLRVGKNDDFFPHNGRWNFNNKTLLQPTHIGLWAVVNFSARCDTSFISRELIKCGMNKGIHIERPYTLIEEESQMRRSSPVARVEKMFELLYAKVPDEPNLILCVLPERKNCDIYGPWKKKCLSEVGVVTQCISPFKINDQYLTNVLLKINSKLGGINSLLAIEHSGHLPLIKDIPTLILGMDVSHGSPGRPEVPSIAAVAGSRCWPLISRYRASVRTQSSKVEIIDTLYKPLADGKDDGIIRELLLDFYHSSKGRKPTQIIVFRDGVSESQFNQVLNIELDQIVKAYQHLGDVDVPKFTVIVAQKNHHTRLFQANGPENVPPGTVVDTKIVHPRNYDFYMCAHAGMLGTSRPAHYHVLLDEIGFSADGLQNLIHSLSYVYQRSTTATSIVAPIRYAHLAAAQMGQFLKYDDLSETSSSFTTAVDAPVPELPRLHSNVQSSMFFC 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2581 901 Gene3D paz domain 265 392 - -
Dere04g2581 901 SMART Piwi_a_2 557 865 IPR003165 GO:0003676
Dere04g2581 901 SUPERFAMILY PAZ domain 266 428 IPR036085 GO:0005515
Dere04g2581 901 CDD Piwi_ago-like 432 859 IPR045246 -
Dere04g2581 901 SMART PAZ_2_a_3 266 410 IPR003100 GO:0005515
Dere04g2581 901 Pfam Piwi domain 557 865 IPR003165 GO:0003676
Dere04g2581 901 SUPERFAMILY Ribonuclease H-like 547 863 IPR012337 -
Dere04g2581 901 CDD PAZ_argonaute_like 271 387 - -
Dere04g2581 901 Pfam N-terminal domain of argonaute 50 209 IPR032474 -
Dere04g2581 901 ProSiteProfiles PAZ domain profile. 296 388 IPR003100 GO:0005515
Dere04g2581 901 SMART DUF1785_2 219 271 IPR014811 -
Dere04g2581 901 Gene3D - 452 618 - -
Dere04g2581 901 Pfam Argonaute linker 1 domain 221 267 IPR014811 -
Dere04g2581 901 Gene3D - 624 901 IPR036397 GO:0003676
Dere04g2581 901 FunFam Protein argonaute 3 625 901 - -
Dere04g2581 901 FunFam Protein argonaute 7 266 392 - -
Dere04g2581 901 Pfam Argonaute linker 2 domain 414 459 IPR032472 -
Dere04g2581 901 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 34 867 - -
Dere04g2581 901 ProSiteProfiles Piwi domain profile. 557 865 IPR003165 GO:0003676
Dere04g2581 901 MobiDBLite consensus disorder prediction 9 31 - -
Dere04g2581 901 Pfam PAZ domain 277 404 IPR003100 GO:0005515
Dere04g2581 901 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2581 Dere-ChrDere04 33976036 33983233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2581 40 901 Eukaryotic Initiation Factors Gene Family AT5G43810 37.266 6.41e-174 528