Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2558 ATGGGAGGTTTCTCTAACCTCTTCTTCTTCTTCGCTTTCCTCACTTTCTTCCCTACAACTTCAATCTCTTCAGATATTCTTAATTCAACACAATCTCTCAGAACCAACGAAACGCTTTCATCTCCAAAGCAGATTTTCGAGGTGGGTTTCTATTCTCCAGACAGCTCCAGATACTATCTGGGAATCTGGTACAAGAACATTCCTGATCAAACAGTGGTTTGGGTCGCAAACAGAGACACCCCACTTGAGGATCCAAAAGGGTTTGTCAAGATCGGAGACAGAGGAAACATGGTGATCTTCAATCAATCAGGGAACCCCATATGGTCCTCGAATCAAACCACAGCCAAAAACCCTGTTCTTCAGATTCTCGATACGGGGAATCTGATTCTCAGAGAAGCAGATTCGGATAGTCCCTTGAATTCTCTCTGGAACAGCTTCGATTACCCCACAGACACACTCTTACCAGGCATGAAGCTTCTCTATAACTATGACACAGGCCTGGAGAAGCACATAACTTCATGGAGTAGCAGCGATGATCCATCAAGCGGAGGTTTTTCCTTCAAGCTCGATTTCCATGGCCTCCCAGAGATCTTCCTCCGGAACGAACAGACCAAGATGTATCGAAGTGGTCCTTGGAATGGCGAAAGATTCAGTGGGGTTCCAGAAATGCAACGAGGCACAGACACCATTCAGTTCACCTTCCATGAAGATGAACACCAAGTGTACTACACATTCTCCATTGGAAACCATTCTCTGCTTTCGAGACTCGCTGTAACATCTGGAGGCGAGCTTCAACGCATGACATGGATAGAAGACAATCAAGTTTGGACTAAATTCTGGTACGCACCGAAAGATCAATGCGATGATTACAGAGAGTGTGGTCCATATGGGATTTGCGACACAAATGCTTCCCCAGTTTGTACATGTATGAGAGGGTTCAGGCCGAAGAACCAGCAAGCATGGAATCTGAGAGATGGGTCCGATGGGTGTGTGAGGAACACAGATTTGGACTGTGGCACCGACAAGTTCTTGAGGGTGCAGAACGTGAAGCTGCCGGAGACAACCTCGGTGTTCGTGAACAGGAGCATGAACCTTATCGAGTGCGAAGCCCTGTGTCAGAAGAACTGTTCATGCACTGCTTATGCTAACATAGAGATCACCAACGGAGGAAGTGGATGTGTGATGTGGAGTGATGAGCTTATAGACATGAGAGTGTATTCTGAAGGTGGCCAAGATCTATATGTCAGATTAGCAGCTTCTGATATAGGTGGCTCTCACAAGACGAAAGATATTGCTAAGGCTGTAGGCGTTACAGTTGCTGCAGCTATTATAATATTGGGATTCGTCCTCTATTTCTTGTGGAAGAAAGGGAAATTGAAAAGCATATTCAAAGGGAAAACAGAATTCAGAGGTTCTTTCGAGAGAAGTCAAGATTGGCTGATAAATGAGGCAGTGTTCACAACTAATAGAGGAAACTCTGGTGAACGTAATATGGATGAACTAGAGTTGCCATTGTTTGATCTTAATACCATAACAATGGCTACAAACAACTTCTCTGAAGAAAATAAACTTGGAGAAGGAGGCTTTGGGAGTGTTTACATGGGTAGACTGAGTGAAGGCCAAGAAATTGCTGTGAAAAGGTTATCAAGAAACTCTGGTCAAGGAACCGAAGAGTTTAAGACCGAGGTCAAGTTAATTGTGAAACTTCAACACCGAAATCTTGTTCGACTATTTGGTTGCTGTGTTGAGATGGATGAGAAGATACTGCTTTATGAGTACATGGAAAATAGAAGCCTTGATTCCTTTTTGTTTGACAAGGTGAAAAGATCTTTACTCGATTGGCAAAGGCGCTTTAACATTATATGTGGAATAGCTAGAGGGCTTCTTTATTTGCACCAAGATTCTAGATTTAGGATTATTCATAGGGATCTCAAGGCAAGCAATATTCTACTTGACAAGGAAATGAATCCAAAGATATCGGATTTTGGAATGGCTAGAATTTTTGGCACAAATCAAACAGAAGCGAATACAATGAGAGTTGTTGGAACATATGGCTATATGTCACCAGAATATGCTATGGATGGAATTTTTTCGATAAAGTCTGATGTTTTTAGTTTTGGGGTTCTAGTACTGGAGATCATAAGCGGCAAGAAGAACAGAGGGTTCTATTACTCAGACAGTGACTTGAATCTTTTAGGACATGCGTGGAAGGAATGGAAAGAAGGAAGAACATTCCAACTGATTGATCCATCAATTGCGAATTCATATTCGCCATCCGAAGTTCTTCGATGCATACAGGTTGGGCTTCTGTGTGTTCAAGAGCGTGCAGAAGATAGGCCAACAATGTCTACTGTGGTACTGATGTTAAGTAGTGAAACTGCATTGATGCCACAGCCTAAAAGCCCTGGGTTTTGCCTAGGAAGAAGAAACCCTAATGAAACAGATTCTTCTTCAAGTAAGCAAGATGAATCATTCACTGTGAACCAAGTCACAGTCACAATGCTTAATGCTAGGTAG 2517 0.4283 MGGFSNLFFFFAFLTFFPTTSISSDILNSTQSLRTNETLSSPKQIFEVGFYSPDSSRYYLGIWYKNIPDQTVVWVANRDTPLEDPKGFVKIGDRGNMVIFNQSGNPIWSSNQTTAKNPVLQILDTGNLILREADSDSPLNSLWNSFDYPTDTLLPGMKLLYNYDTGLEKHITSWSSSDDPSSGGFSFKLDFHGLPEIFLRNEQTKMYRSGPWNGERFSGVPEMQRGTDTIQFTFHEDEHQVYYTFSIGNHSLLSRLAVTSGGELQRMTWIEDNQVWTKFWYAPKDQCDDYRECGPYGICDTNASPVCTCMRGFRPKNQQAWNLRDGSDGCVRNTDLDCGTDKFLRVQNVKLPETTSVFVNRSMNLIECEALCQKNCSCTAYANIEITNGGSGCVMWSDELIDMRVYSEGGQDLYVRLAASDIGGSHKTKDIAKAVGVTVAAAIIILGFVLYFLWKKGKLKSIFKGKTEFRGSFERSQDWLINEAVFTTNRGNSGERNMDELELPLFDLNTITMATNNFSEENKLGEGGFGSVYMGRLSEGQEIAVKRLSRNSGQGTEEFKTEVKLIVKLQHRNLVRLFGCCVEMDEKILLYEYMENRSLDSFLFDKVKRSLLDWQRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTNQTEANTMRVVGTYGYMSPEYAMDGIFSIKSDVFSFGVLVLEIISGKKNRGFYYSDSDLNLLGHAWKEWKEGRTFQLIDPSIANSYSPSEVLRCIQVGLLCVQERAEDRPTMSTVVLMLSSETALMPQPKSPGFCLGRRNPNETDSSSSKQDESFTVNQVTVTMLNAR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2558 838 MobiDBLite consensus disorder prediction 798 825 - -
Dere04g2558 838 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 780 - -
Dere04g2558 838 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
Dere04g2558 838 Pfam Receptor serine/threonine kinase 474 507 IPR022126 GO:0004674
Dere04g2558 838 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Dere04g2558 838 ProSiteProfiles PAN/Apple domain profile. 338 418 IPR003609 -
Dere04g2558 838 Pfam PAN-like domain 338 403 IPR003609 -
Dere04g2558 838 ProSiteProfiles Protein kinase domain profile. 518 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2558 838 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 146 - -
Dere04g2558 838 FunFam receptor-like serine/threonine-protein kinase SD1-8 490 593 - -
Dere04g2558 838 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 797 - -
Dere04g2558 838 CDD STKc_IRAK 524 789 - -
Dere04g2558 838 SMART serkin_6 518 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2558 838 CDD B_lectin 30 149 IPR001480 -
Dere04g2558 838 SMART ntp_6 338 417 IPR003609 -
Dere04g2558 838 CDD PAN_AP_plant 334 418 - -
Dere04g2558 838 Gene3D Transferase(Phosphotransferase) domain 1 594 798 - -
Dere04g2558 838 Gene3D - 19 146 IPR036426 -
Dere04g2558 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Dere04g2558 838 Pfam Protein tyrosine and serine/threonine kinase 521 787 IPR001245 GO:0004672|GO:0006468
Dere04g2558 838 PIRSF SRK 3 838 IPR024171 GO:0004674
Dere04g2558 838 SMART blect_4 30 149 IPR001480 -
Dere04g2558 838 ProSiteProfiles Bulb-type lectin domain profile. 24 143 IPR001480 -
Dere04g2558 838 MobiDBLite consensus disorder prediction 810 825 - -
Dere04g2558 838 Gene3D Phosphorylase Kinase; domain 1 493 593 - -
Dere04g2558 838 Pfam Domain of unknown function (DUF3403) 791 838 IPR021820 GO:0004674
Dere04g2558 838 SUPERFAMILY Protein kinase-like (PK-like) 496 789 IPR011009 -
Dere04g2558 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Dere04g2558 838 Pfam D-mannose binding lectin 71 174 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2558 Dere-ChrDere04 32891861 32899220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2558 506 810 Receptor kinase-like Gene Family AT4G11530 62.745 6.87e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere04g2558 PK_Tyr_Ser-Thr 8.6e-49 CL0016