Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2555 ATGATCATGAAGGAGCCTAATGCTTCATCATTTCCTTCAAGAACTTCTCTCAACTTCAACACCATGGGAGGTTTTCTCGACCTCCTCCTCCATATCAGTCTCTTTTGGAGCTTTGCCTTACTCTCTTTATTTTCTCCAGTTTCAATCTCTGTTGATACCTTAACTTCAACCCAATCTCTTGGAATCAACCAAACGCTTATATCTCCCAATCAAGTGTTTGAACTAGGCTTCTTTAACTCAACCACGTCGAGTTCTAAATGGTACTTAGGAATCTGGTACAAGAACATTCCTCAGAGAACAATTGTTTGGGTCGCAAACAGAGACACCCCACTTGAGAATTCGACTGCAACATTGAAACTCGGAGACAGAGGAAACCTGGTTCTTCTTGATCCTGCAGGAAACTCCAAATGGTCCTCGAATCAATCAGAAGCAGTAACTTCAAGTTCGAACCTCGTGCTTCAGCTTTTGGATTCTGGGAACCTGGTTCTTAATGACACCACCAAGATTCTCTGGCAGAGTTTTGATTTCCCAACTGATACTTTATTACCTGGTATGAAGCTAGGATGGGACTTAGTCACTGGCATTGAACGGCGTATAACATCATGGAAGAGCCAAGATGATCCATCGAGTGGAGATTACTCTTTCAGACTAGAATACCGTGGAATCCCAGAAGCATTTCTGTATAACAAAGAGGTCAAGACTTTTCGAACTGGGCCATGGAATGGTATCAGATTTGGAGGATTACCAGTACTGACATCACAAGCTGTTGTGCAAGACACTATGGTTGAAGATGCACATGAGGTTTACTATACACCCTCCTCGGTTTTCACTGGGAATCAATCAATACTTACAAGGCTTGTTGTAAACTGGACAGGTGAAGTTCAACGCTTTGCAATGACAGAAGACAGCCAAAGTTGGAACATGTTATGGTCTGCACCAAAAGACCAATGTGATGGTTACTTTGAGTGTGGTCCATATGGCATATGTGATGCTAATGCTTTTCCTGCATGCAAATGCTTTCAAGGGTTCAATCCCAAGAACCAACAACAATGGGATTTAAGAGATTTTTTGAGTGGCTGCACGAGAAGCACCGGGTTGGAATGTGGGGAAGACAAGTTCTTGCAGCTGCAGCACGTGGAATTACCTGATACCACGACAGTGTTTGTGAACAAGACCATGTCTCTCTCACAATGTGAGGATATGTGCAGGAAAAATTGTTCTTGTAATGCTTATGCTAATGTGGAGGTTACTAATGGAGGGACTGGTTGTGTGATGTGGACTGAGGAGCTCAAAGACATGAGGCAGTTTTCTGAAGGTGGCCAAGATGCCTTTATCAAAGTGGCTGCTTCTGTTATTGCTGATTCAGGGCCTGCAGGAGGATCTGGCAAGAAGAACAATGTAGGCATGATTGTAGGCATTACAGTCGGTGCAATTATCTTAGTTTTGGGGATGGTTATCTTTGTTTTGTGGATGAAGAGGAGATCACAGAATATACCAAAAAGAAGAACAGAGCAGTTAGGTGGCATTGGGATGAGTCAAGAAATGCTATTTTATTCAAGAAATACAGAACATTCAGGTGATAGGAACATGGATGACCTAGAGTTGCCATTGTTTGATTTTAATACCATAACAATGGCTACAGACAACTTCTCTGAGACAAATAAACTTGGACGAGGAGGCTTTGGAAGCGTTTACCGGGGTAGGTTGTTTGAAGGCCAAGAAATTGCTGTGAAGAGACTATCAAAAAGCTCTGGACAAGGAACTGAAGAATTCAAGAATGAGGTTAGGTTAATTGCAAAGCTTCAACATAGAAATCTTGTAAGAATGTTTGGTTGCTGTATTGAGAAGGATGAAAAGATGTTGGTCTATGAGTACATGGAAAATACAAGCCTTGATTTCTTTCTATTTGACAAAGAAAAAGGTTCTTTATTGGATTGGCAATTGCGCTTCAACATTATATGTGGAATAGCTAGAGGACTTCTTTATCTTCACCAAGACTCTAGGCTCAGAATTATTCACAGAGATCTCAAAGCAAGCAACATTTTACTTGATAAAGAAATGAATCCAAAAATATCAGATTTTGGGATGGCTAGAATTTTCGGCAATGATCAAACAGAGGCAAATACAATCAGAGTTGTTGGAACATATGGCTATATGTCTCCAGAATATGCATTAGACGGGCTTTTCTCTGTAAAGTCAGATGTTTTTAGCTTTGGAGTTCTTGTACTAGAGATCGTAAGTGGCAGAAAGAACAGAGGATTTTATTACTCAGACGAGTTAAACCTACTCGGACATTCATGGAGGCTGTGGAATGAAGGGCGTGCAATGGAACTGGTAGATTCATCATTTGGTAATTCATATTCATCTTCTGAAGCTTTGAGATGCATACAGATTGGTCTCATATGTGTTCAAGAAAGACCAGAAGATAGGCCAACAATGGCTTCAGTGGTGCTGATGTTGAGCAGTGAAAATGCACCAATACCACAGCCTGGAGTCCCCGGTTTTAGCCTTGCAAGGACTCCTATTCAGACTGATTCTTCTTCAGTGCAACAAGAAGGGTCATACTCAGTGAACCAAGTGACAGTCACTGTAGTTGATGCCCGATAA 2607 0.4143 MIMKEPNASSFPSRTSLNFNTMGGFLDLLLHISLFWSFALLSLFSPVSISVDTLTSTQSLGINQTLISPNQVFELGFFNSTTSSSKWYLGIWYKNIPQRTIVWVANRDTPLENSTATLKLGDRGNLVLLDPAGNSKWSSNQSEAVTSSSNLVLQLLDSGNLVLNDTTKILWQSFDFPTDTLLPGMKLGWDLVTGIERRITSWKSQDDPSSGDYSFRLEYRGIPEAFLYNKEVKTFRTGPWNGIRFGGLPVLTSQAVVQDTMVEDAHEVYYTPSSVFTGNQSILTRLVVNWTGEVQRFAMTEDSQSWNMLWSAPKDQCDGYFECGPYGICDANAFPACKCFQGFNPKNQQQWDLRDFLSGCTRSTGLECGEDKFLQLQHVELPDTTTVFVNKTMSLSQCEDMCRKNCSCNAYANVEVTNGGTGCVMWTEELKDMRQFSEGGQDAFIKVAASVIADSGPAGGSGKKNNVGMIVGITVGAIILVLGMVIFVLWMKRRSQNIPKRRTEQLGGIGMSQEMLFYSRNTEHSGDRNMDDLELPLFDFNTITMATDNFSETNKLGRGGFGSVYRGRLFEGQEIAVKRLSKSSGQGTEEFKNEVRLIAKLQHRNLVRMFGCCIEKDEKMLVYEYMENTSLDFFLFDKEKGSLLDWQLRFNIICGIARGLLYLHQDSRLRIIHRDLKASNILLDKEMNPKISDFGMARIFGNDQTEANTIRVVGTYGYMSPEYALDGLFSVKSDVFSFGVLVLEIVSGRKNRGFYYSDELNLLGHSWRLWNEGRAMELVDSSFGNSYSSSEALRCIQIGLICVQERPEDRPTMASVVLMLSSENAPIPQPGVPGFSLARTPIQTDSSSVQQEGSYSVNQVTVTVVDAR 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2555 868 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 626 828 - -
Dere04g2555 868 SMART ntp_6 368 447 IPR003609 -
Dere04g2555 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 671 683 IPR008271 GO:0004672|GO:0006468
Dere04g2555 868 SMART blect_4 57 177 IPR001480 -
Dere04g2555 868 CDD B_lectin 57 177 IPR001480 -
Dere04g2555 868 ProSiteProfiles Protein kinase domain profile. 550 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2555 868 ProSiteProfiles Bulb-type lectin domain profile. 51 176 IPR001480 -
Dere04g2555 868 Pfam S-locus glycoprotein domain 235 347 IPR000858 GO:0048544
Dere04g2555 868 Pfam Protein tyrosine and serine/threonine kinase 553 818 IPR001245 GO:0004672|GO:0006468
Dere04g2555 868 Pfam D-mannose binding lectin 100 203 IPR001480 -
Dere04g2555 868 PIRSF SRK 25 868 IPR024171 GO:0004674
Dere04g2555 868 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 514 625 - -
Dere04g2555 868 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 35 807 - -
Dere04g2555 868 SUPERFAMILY alpha-D-mannose-specific plant lectins 101 208 IPR036426 -
Dere04g2555 868 ProSitePatterns Protein kinases ATP-binding region signature. 556 578 IPR017441 GO:0005524
Dere04g2555 868 Pfam Domain of unknown function (DUF3403) 822 868 IPR021820 GO:0004674
Dere04g2555 868 Pfam PAN-like domain 368 433 IPR003609 -
Dere04g2555 868 Gene3D Transferase(Phosphotransferase) domain 1 626 826 - -
Dere04g2555 868 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 47 174 - -
Dere04g2555 868 Gene3D Phosphorylase Kinase; domain 1 524 625 - -
Dere04g2555 868 ProSiteProfiles PAN/Apple domain profile. 368 448 IPR003609 -
Dere04g2555 868 CDD STKc_IRAK 556 820 - -
Dere04g2555 868 SUPERFAMILY Protein kinase-like (PK-like) 533 820 IPR011009 -
Dere04g2555 868 Gene3D - 46 174 IPR036426 -
Dere04g2555 868 SMART serkin_6 550 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2555 868 CDD PAN_AP_plant 366 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2555 Dere-ChrDere04 32837323 32840691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2555 457 835 Receptor kinase-like Gene Family AT4G23190 51.958 4.58e-138 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere04g2555 PK_Tyr_Ser-Thr 7.8e-49 CL0016