Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2512 ATGGAACCCAGATTCCGGTTACCGCTTCTCTTCTTGTTGCTATCCTCTGTTTGTTTCAGTGCAGAATCGAAGTGTAAAAATGAATGCGATTTGGCTCTAGCCTCCTACTATGTTTGGGTCGGTTTTTCCAATCTGACGTACCTTCCCCTCATTATGCAATCCCAGGTTCTTCAAAGTGCTCAAGATATCGTCAATTACAACAAAGGAGAATTATCTAGTGTAAACTATGTCCAAACCACTACTAGAGTGAATGTTCCGTTCCCTTGCCATTGCATCGGAGGTGAATATTTAGGTCACGTATTCGAGTACCCACTTCAGCCAGGGGACACCTATACGTCGGTTGCGAACGAGAGCTATTCCAATTTGACAACTGATTCGTGGTTGCAGAGCTTGAATAGCTACCCACCAACCAATATTCCTGATTCTGGCACGCTAAACGTGACGGTGAACTGTTCATGTGGAAATAGCGAAGTTTCGAAAGATTATGGATTATTCATCACGTACCCACTTAGAGTTGAGGATTCTTTGGAGTCAATTGCGAACCAGACGAATCTTGATGCGGCGTTGCTCCAGAGATATAATCCTGGTGTTAATTTCAGCAAGGGGAGTGGTCTGGTTTATATACCGGGGAGAGGTATATTCTTATTTGGTCTAGCAGGTGGGGCTATTGCTGGAATATCTGTTGGAGCAGTAGCAGGGGTTCTGTTATTGGCAGTTTGTATTTATGTTGCATATTACCAAAAGAAGAAGGTGGAGGAGGAGAAATTGCTTTCAGGAGAATCAGAGGTGTACTCTGCTCAACCTGGGAAGGATTTCAACAGTCCTACTGCTGCTGATAACACTGGCATCAAAGGCATTACCGTGGACAAATCAGTGGAGTTCTCATATGAGGAACTAGCTAATGCCACAAATAACTTCAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCAGTAAAAAAGATGGAGATGCAAGCTTCAAGAGAGTTTCTTGCTGAATTGAAAGTGTTAACAAATGTTCATCACCTGAACCTGGTACGCTTGATTGGATACTGCATTGAGGGTTCTCTTTTCCTTGTCTATGAATACATTGACAATGGAAACCTAAGCCAACACCTACGAGATTCAGGGAGGAAACCCTTGCCATGGTCTACCCGGGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATACATTCACGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGCTAATATATTGATAGACCAAAACTTCCGTGGAAAGGTTTCAGATTTTGGATTATCCAAGCTGACTGAAGTGGGAAGTTCATCAGTTCCCACTGGTAATATCGCAGGCACATTTGGTTACATGCCACCCGAATATGCATACGGTAGTCTTTCGCCGAAGATAGATGTCTATGCTTTCGGAGTTGTTCTTTATGAACTCATATCTGCTAAAGAAGCTGTGATCCGGATCAGTGAATCTGGTTCTGAAACAACAAAAGGCCTTGTTTCTTTGTTTGATGGAGTTCTTGAGCAAACTGATCCTAAAGAAGATCTTCAAAAACTTGTTGATTCTAGGCTTGGAGACGATTACTCAATTGATTCAGTTTACAAGATGGCACAACTTGCCAAAGTGTGCACAGAGACAGAGCCACAACGACGTCCAAGTATGAGATCCATTGTGGTGGCTCTCATGGCACTCTCTTCTGCTACTGTGGAATGGGATATAGCCTCCTTATACGAAAATCCAGCACTCGTAAATTTGATGTCTGGAAGATAG 1818 0.4318 MEPRFRLPLLFLLLSSVCFSAESKCKNECDLALASYYVWVGFSNLTYLPLIMQSQVLQSAQDIVNYNKGELSSVNYVQTTTRVNVPFPCHCIGGEYLGHVFEYPLQPGDTYTSVANESYSNLTTDSWLQSLNSYPPTNIPDSGTLNVTVNCSCGNSEVSKDYGLFITYPLRVEDSLESIANQTNLDAALLQRYNPGVNFSKGSGLVYIPGRGIFLFGLAGGAIAGISVGAVAGVLLLAVCIYVAYYQKKKVEEEKLLSGESEVYSAQPGKDFNSPTAADNTGIKGITVDKSVEFSYEELANATNNFSMANKIGQGGFGAVYYAELRGEKAAVKKMEMQASREFLAELKVLTNVHHLNLVRLIGYCIEGSLFLVYEYIDNGNLSQHLRDSGRKPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDQNFRGKVSDFGLSKLTEVGSSSVPTGNIAGTFGYMPPEYAYGSLSPKIDVYAFGVVLYELISAKEAVIRISESGSETTKGLVSLFDGVLEQTDPKEDLQKLVDSRLGDDYSIDSVYKMAQLAKVCTETEPQRRPSMRSIVVALMALSSATVEWDIASLYENPALVNLMSGR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2512 605 FunFam LysM receptor kinase 2 285 376 - -
Dere04g2512 605 FunFam PTI1-like tyrosine-protein kinase 3 377 591 - -
Dere04g2512 605 ProSiteProfiles Protein kinase domain profile. 306 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2512 605 Pfam Protein tyrosine and serine/threonine kinase 308 576 IPR001245 GO:0004672|GO:0006468
Dere04g2512 605 SMART serkin_6 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2512 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Dere04g2512 605 Gene3D Phosphorylase Kinase; domain 1 278 376 - -
Dere04g2512 605 Gene3D Transferase(Phosphotransferase) domain 1 377 591 - -
Dere04g2512 605 SUPERFAMILY Protein kinase-like (PK-like) 287 577 IPR011009 -
Dere04g2512 605 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Dere04g2512 605 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 590 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2512 Dere-ChrDere04 31814418 31835723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2512 1 605 Receptor kinase-like Gene Family AT3G21630 56.410 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere04g2512 PK_Tyr_Ser-Thr 3.8e-45 CL0016