Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2511 ATGGATGCTATTGGTCAAAATGCCAGTGAGCTGTTTCAAGGCCAAGCCCAGTTGTACTGGCAAATGTGTCTTTGCGTGCCTCCTATGTGCCTCAAGTGTGCCATTGAACTAGGAATTCCAGACTCTATCTACAAGCATGGCCAAGCCATCACTCTTTCTTATGAGGATCTCACACTACCCCAGACCACACTTGAAGAAGGCTATTGGGACTTCCTTAGTCAAAACCCTGCATATATGATAGCCTTCAATGAAGCAATGGCAAGTGATTCACTGATCATAAACTGTGCACTGCCAGACTTGGGTTTTGTTTTTGAGGGCTTGAGTTCCATCGTTGATGTTGGTGGTGGAACTGGGACCATTGCTCAGATAATTTGTGAGGCTTTTCTTAATATGAAATGCACAGTGCTTGACCTTCCTAAAGTTGTAGCAAACTTATCATCAGAAAACGCCAATCTGAGTTCTTTTGGTGGGGACATGTTGAAATCCATCCCTCATGCTGATGTAGTTATGCTGAAGTGGGTTTTACACAACTGGAGTAATAATGATTGCATAAAGATATTTAAAAATGCCAAAGAAGTTATCCCAGGCAGGGTCAAAGGAGGAAAAGTCATCATCATAGATACAGTAATAAATGAAAAGCAAGACGAGCATCAACTGCTAGAAATAAGGCTTCTATTCCACACACATATGATGGCTGTACATAATGGAAGCAACTCTTCTTAG 723 0.4177 MDAIGQNASELFQGQAQLYWQMCLCVPPMCLKCAIELGIPDSIYKHGQAITLSYEDLTLPQTTLEEGYWDFLSQNPAYMIAFNEAMASDSLIINCALPDLGFVFEGLSSIVDVGGGTGTIAQIICEAFLNMKCTVLDLPKVVANLSSENANLSSFGGDMLKSIPHADVVMLKWVLHNWSNNDCIKIFKNAKEVIPGRVKGGKVIIIDTVINEKQDEHQLLEIRLLFHTHMMAVHNGSNSS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2511 240 Gene3D Vaccinia Virus protein VP39 73 240 IPR029063 -
Dere04g2511 240 PANTHER O-METHYLTRANSFERASE 67 236 IPR016461 GO:0008168
Dere04g2511 240 SUPERFAMILY "Winged helix" DNA-binding domain 9 61 IPR036390 -
Dere04g2511 240 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 240 IPR016461 GO:0008168
Dere04g2511 240 Gene3D - 2 65 IPR036388 -
Dere04g2511 240 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 58 233 IPR029063 -
Dere04g2511 240 Pfam Dimerisation domain 29 53 IPR012967 GO:0046983
Dere04g2511 240 CDD AdoMet_MTases 110 210 - -
Dere04g2511 240 Pfam O-methyltransferase domain 67 237 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2511 Dere-ChrDere04 31801309 31802801 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2511 69 235 Monolignol Biosynthesis Gene Families AT5G54160 32.738 7.48e-26 102