Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2508 ATGTTGCAACACTTGGTGAAATGGGTTCATAGTGAGGATCTCACACTACCCCAGACCACACTTAGAGTAGTCTATCAGGACTTCCTTAGTCAAAACCCTGCATATATGACAACATTCAATGAAGCAATGGCATGTGATTCTCAAATCCTAAACTGCACACTGAGAGACTTGGATTTTGTTTTTGAGGGCTTCCGTTCCATCGTTGATGTTGGTGGTGGAACTAGTACAGTTCCCAACTTGAAATGCACAGTGTTAGCCCTTCCTAAAGTTGTAGAAAACTTATCATCAAGACACTCCAATCCGAGTTTTGTTAATGGGGACATGCTCAAATCCATCCCCCTTGCTGATGCAATTTTGCCAAAGTGGGTTTTACACAACTGGAGTGATGATGATTGCTTAAAAATACTTAAAAATGGCAAAGAATGGAAGCAACTGTCCCTGAAAGCAGTAGTCTGGTCCAAAGGTGTTCGAAGCCAGCCAAGCCAATTTCCGCAACGGAGAGCAGATCGGAGCCAAAGAGAAAAGGGAAGGCAGTAG 537 0.4339 MLQHLVKWVHSEDLTLPQTTLRVVYQDFLSQNPAYMTTFNEAMACDSQILNCTLRDLDFVFEGFRSIVDVGGGTSTVPNLKCTVLALPKVVENLSSRHSNPSFVNGDMLKSIPLADAILPKWVLHNWSDDDCLKILKNGKEWKQLSLKAVVWSKGVRSQPSQFPQRRADRSQREKGRQ 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2508 178 PANTHER O-METHYLTRANSFERASE 25 142 IPR016461 GO:0008168
Dere04g2508 178 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 178 IPR016461 GO:0008168
Dere04g2508 178 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 138 IPR029063 -
Dere04g2508 178 Gene3D Vaccinia Virus protein VP39 1 146 IPR029063 -
Dere04g2508 178 Pfam O-methyltransferase domain 29 140 IPR001077 GO:0008171
Dere04g2508 178 MobiDBLite consensus disorder prediction 157 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2508 Dere-ChrDere04 31752178 31754357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2508 27 141 Monolignol Biosynthesis Gene Families AT5G54160 39.024 2.87e-20 84.7