Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2506 ATGTGTCTTTGCGTGTCTCCTATGTGTCTCAAGTATGCCATTGAACTTGGAATTCTAGACGCTATCTACAAGCATGGCCAACCCATCACTCTTTTTCAGTTGGTGTCAGCACTTAAAGTTCCACCAGCTAAAGCCACTTTTGTACAGGGGCTCATGCGTGTGCTGGCTCACAATGGCATCTTTGCTATCCTAGAAAACAACAATGAAGAAAGTGAAGTAACATATGATCTCACTCCTGCATCTTGTCAATGGCATCAATCCTTGTTTATCTTCAATGCTTTAGTGGGGTCTAGACACATGATGGGTGGATATGTTGCAACACTTAGCGAAATGGCATTCAATGAAGCAATGGCAAGTGATTCTCAAATCCTAAACTGTGCACTGAGAGACTTGGATTTTGTTTTTGAGGGCTTCAGTTCCATCGTTGATGTTGGTGGTGGAACTGGTACAGCTGCTAATATAATCTGTACGGCTTTTCCTAACTTGAAATGCACAGTGTTGGACCTTCCTAAAGTTGTAGCAAACTTATCATCAGGAAACTCCAATATGAGTTTTGTTGGTGAGGACATGCTCAAATCCTTCCCCCTTGTTGATGTAGTTTTGCTAAAGTCGGTTTTACTCAACTGGAGTGATGATGACTGCATAAAAATACTTAAAAATGCCAAAGAAGCTATATCAGACAAGTCTGGTCCAAAGGTGTTCGAAGCCAGCCAAGCCAATTTCCCCAACGGAGAGCATATCGGAGCCAGAGAGAAAAGGGAAGGCAGTAGTAGTAATGACGATGTTGGAGGATTGAGAAATTATCCAGTCAATGTAGATATGGGCGTGTTGGTTCATATTCATTGTGCACTTTACTCCCACATTTGGACCAATGCATTGAAATCAACTTGGGGTTCAGCCGAACAAGATCTATTGCTGTCGTCTAGGTGGCTGCTTGAGGAAATCACCAGAGGAAGACAGAATCATGGTTGTTGGAGGAAATCCACTGAAAGAAGACAAAGGAAGTTAGAGGAGGATGGAAATCCAATAGAGGCAATTCGTCGATGTGTTTTACTTATAGAATGCTTCAACCGTGAGGTATTTGATGCTATAAAGCATCCATCACATTATACAAGGAACCTTCTTGAATATTGTTGTTTTAGGGCACTTGCTCTATCAACACAAGTCACCACTCATCTTTCTGATAAACAGTTCCGATGCTTGACATATGACATGATGCTAGCCTGGGGCGCCTCAGTTACTGACAGCCAGCCATTGCTTAATAAGGTTTCAAACACCCCAAACGAGAGCAAGCTTGTTGTGGGTGAGACATTTGTTGGAGAAATAACTCCATTGGAAAGAGCAGTCAAAGAATCTATGAACAACTATAAAAAGGTAGTATTTACACAAGTAACTATTTATGGAGTTAAAGTTGATGGGAATGGCTTCATCCTGGCACCACGGCCACGAGAACCCAGACCTCATTTCTCTCTTAAAACTCGAGATCCTCTTTCACTGCCTCCTGGCGCTCTCCTTTTGGGCCCTCTTTCACGCTTTCTCTACATTTGCCCTTATACTAGTGTTACCCGCTCCCCACATAGAAGCTATAGAGACACAAAAGAGAAAGGGTGCTATAGGACCATATTGCTTGATGTGATAGCACTGAGCAATGAGAGTGAGAAGACTCAAAGATTGAATGTGGAGAGAGAGATTTGGATAAGCAAGAGAAAGCATGAGAGAGAAGGAAGGGAGTGCTTTAGTCTTACATGGCCTCCATGCTGTTGA 1764 0.4263 MCLCVSPMCLKYAIELGILDAIYKHGQPITLFQLVSALKVPPAKATFVQGLMRVLAHNGIFAILENNNEESEVTYDLTPASCQWHQSLFIFNALVGSRHMMGGYVATLSEMAFNEAMASDSQILNCALRDLDFVFEGFSSIVDVGGGTGTAANIICTAFPNLKCTVLDLPKVVANLSSGNSNMSFVGEDMLKSFPLVDVVLLKSVLLNWSDDDCIKILKNAKEAISDKSGPKVFEASQANFPNGEHIGAREKREGSSSNDDVGGLRNYPVNVDMGVLVHIHCALYSHIWTNALKSTWGSAEQDLLLSSRWLLEEITRGRQNHGCWRKSTERRQRKLEEDGNPIEAIRRCVLLIECFNREVFDAIKHPSHYTRNLLEYCCFRALALSTQVTTHLSDKQFRCLTYDMMLAWGASVTDSQPLLNKVSNTPNESKLVVGETFVGEITPLERAVKESMNNYKKVVFTQVTIYGVKVDGNGFILAPRPREPRPHFSLKTRDPLSLPPGALLLGPLSRFLYICPYTSVTRSPHRSYRDTKEKGCYRTILLDVIALSNESEKTQRLNVEREIWISKRKHEREGRECFSLTWPPCC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2506 587 Gene3D Vaccinia Virus protein VP39 104 240 IPR029063 -
Dere04g2506 587 PANTHER O-METHYLTRANSFERASE 6 234 IPR016461 GO:0008168
Dere04g2506 587 SUPERFAMILY "Winged helix" DNA-binding domain 4 82 IPR036390 -
Dere04g2506 587 Pfam Dimerisation domain 8 56 IPR012967 GO:0046983
Dere04g2506 587 Gene3D - 1 83 IPR036388 -
Dere04g2506 587 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 319 IPR016461 GO:0008168
Dere04g2506 587 Pfam O-methyltransferase domain 90 227 IPR001077 GO:0008171
Dere04g2506 587 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 227 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2506 Dere-ChrDere04 31692456 31698676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2506 5 227 Monolignol Biosynthesis Gene Families AT5G54160 27.969 4.41e-20 90.5