Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2435 ATGCTTGGAGTAGGTACTACTGGGGAAGGCATGCAGGCAATCTGTTTGATATTATTCTTGTATGGGGTGATTGCATTCGGGAATTCAGATATTGATGCACTACTTGAACTCAAGAAGAGCATTCAATATGACCCTTCTGGACTAGTAGTTAATTCTTGGGATTCTGGGTCTTTAACTTCTGATGGATGTCCTCAGGGTTGGCATGGGATATTGTGTACTGAAGGCAATGTTATATCAATAACTTTGGATTATGCTGGTTTGGTTGGAGACTTTAATTTCCACGCCATTAATGGCCTTAAAATGCTTCGAAACTTGTCTGTTTCGAACAACCAATTCACAGGAAGTGTCTTACATTTTGGTCCAATGGAGTCACTTGAATATCTTGATCTTTCAGCCAACAAGTTTCATGGGTTGGTACCCTCTGACTTGCTTGAATTACATAATTTAGTGCATTTGAATCTTTCATCAAATCAATTTGAAGGTACAATTCCTGTTGGCTTTGACGAACTCAAGCGGTTGAAGTATTTAGACTTGCATGCTAATAACTTTTCTGGGGATATTATGCGTATCTTTTCTCATATGGGCAGTGTGGTTCATGTTGACCTAAGCAGCAACAGGTTTTCTGGTTCACTGGATTTGGGGCTTGGGAACAACTCCTTTCTCTCCTCAATCCAGTATTTCAATATTAGCCACAATTCCTTGATTGGTGAGCTGTTTGCCCATGATGGGATGCCATATCTTGACAATTTAGAGGTCTTTGATGCTAGTCATAATCAATTAGTAGGTAATATACCTTCCTTCACATTTGTGGTATCTCTACGGATTCTTCGGCTTGGATGCAACCAGTTATCCGGTTCTCTGCCAGGAGGTCTATTAAAGGACAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAATAAGCTTGAAGGTCCCATTGGCAGCATTACCTCTGTAACACTGAAGAAGCTTAATATATCTTCTAACAAACTGTCCGGCCCCTTACCTCTCAAGGTAGGCCACTGTGCCATAATAGATTTAAGTAATAACATGCTGTCAGGTAACTTGTCGAGGATCCAGTATTGGAGTAATTATGTTGAGGTGATTCAGCTAAGTTCAAACTCATTGACAGGGATGCTGCCAAACCAAACTTCTCAATTTTTAAGGTTGACTGCACTTAAGCTATCCAATAACTCATTAGAGGGCACTCTTCCACCAGCATTGGGAACATACCCAGAATTAAAAGAGATTGATCTTAGCCTCAATCTGCTTTCTGGGTTTCTCCTTCCAAGCTTTTTCACTTCAACCAAATTGACCAATCTCAATTTCTCACACAACAACATTTCTGGATCATTAGATGTTCAGCAAATTCCAAATAACCCACTAGTTTATGCTGAAAATTCTAATCTGGCATCTATTGATCTTTCAAACAACAATTTAAGCGGGCATCTACCCTCAGAAATAAGTAAGCTTCACAATTTGGCAAGTCTCAATCTATGTAATAACCAATTTGAAGGTACTATTCCTGATGATCTTCCTGATAAACTGAGAGATTTCAATGTGTCCTTCAATAATTTTTCTGGTGTTGTGCCTGATAAATTATTGAAGTTTCCTGAATCAGCATTTCACCCAGGAAATTCTTTGCTGATATTTCCACATTCACCCATGTCACCAAAAGATGTTAGCGACCTAAATTTGAGGGATCACGGGCGACATATAAAATCTGCAACCAAGATTGCCTTGATAGCAAGTTTGGTTTCTGGTGCTTTTTTGATGGCCCTTGTGAGTATAATAATTTGTTATAGGGTTCAAGGGCAAAAACAAATGACTTCTAAAGAAAACAGAGCAAAAGATATCGCCCACGAGAGTTCTTCCCCATCTAGTAGAGAAGTGCCTAATAGAAATGTAGAAGCATTATCCTCGGCCCAAAAGGGGTCTGATGATGTCAGCAATATTCATGCTGCAGTAGAGAAGCCAAAAGATTTCGACTTTTCTGGATTAGTTAAGATTGAGGAAGGAATATCTTCTCCAATATCTTTTTTGTCTGCTTCAAATCCTTCATCTTCTAGGAGCCACCCATTTGAGAATCCCAGTGCCTTCAAAATATGCTCCCCGGATAAATTAGTTGGGGATTTGAATCTATTTGATGGGTCCTTGGAGCTCACTGCAGAAGAATTTTCTAATGCTACAGCAGAAGTTATTGATAGAAGTGTTCATTCAATGTCTCTTGATGAAAGGTTCAGGGTGGCTGTAATCGTGGCACAATGTCTGCATTACTTACATAATGAGAAAGCCATACCACATGGCAATCTCAAATGTACAAACATCCTACTTGAAATTCCTAACCGGAATGTACTGCTCACTGACTATAGCCTGCATCGAATACTAACTGCTGCCGGTACTGCTGAGCAAGTTCTAAATGCAGGTGCTCTTGGTTACCGACCTCCTGAGTTTGCTAGCTCAAGCAAACCGTGCCCATCATTGAAGAGTGATGTTTATGCATTCGGGCATGGCGGGGGCGAACACCTGCCTGGAGTTCTTGATGAAATGCTGAAGGTGGCTCTTAGATGCACCCTCCCAGCATCTGAGAGGCCTGACATGAAAACTGTTTTTGAAGATCTTTCTACAATAAGGTAG 2637 0.4035 MLGVGTTGEGMQAICLILFLYGVIAFGNSDIDALLELKKSIQYDPSGLVVNSWDSGSLTSDGCPQGWHGILCTEGNVISITLDYAGLVGDFNFHAINGLKMLRNLSVSNNQFTGSVLHFGPMESLEYLDLSANKFHGLVPSDLLELHNLVHLNLSSNQFEGTIPVGFDELKRLKYLDLHANNFSGDIMRIFSHMGSVVHVDLSSNRFSGSLDLGLGNNSFLSSIQYFNISHNSLIGELFAHDGMPYLDNLEVFDASHNQLVGNIPSFTFVVSLRILRLGCNQLSGSLPGGLLKDSSMMLSELDLSQNKLEGPIGSITSVTLKKLNISSNKLSGPLPLKVGHCAIIDLSNNMLSGNLSRIQYWSNYVEVIQLSSNSLTGMLPNQTSQFLRLTALKLSNNSLEGTLPPALGTYPELKEIDLSLNLLSGFLLPSFFTSTKLTNLNFSHNNISGSLDVQQIPNNPLVYAENSNLASIDLSNNNLSGHLPSEISKLHNLASLNLCNNQFEGTIPDDLPDKLRDFNVSFNNFSGVVPDKLLKFPESAFHPGNSLLIFPHSPMSPKDVSDLNLRDHGRHIKSATKIALIASLVSGAFLMALVSIIICYRVQGQKQMTSKENRAKDIAHESSSPSSREVPNRNVEALSSAQKGSDDVSNIHAAVEKPKDFDFSGLVKIEEGISSPISFLSASNPSSSRSHPFENPSAFKICSPDKLVGDLNLFDGSLELTAEEFSNATAEVIDRSVHSMSLDERFRVAVIVAQCLHYLHNEKAIPHGNLKCTNILLEIPNRNVLLTDYSLHRILTAAGTAEQVLNAGALGYRPPEFASSSKPCPSLKSDVYAFGHGGGEHLPGVLDEMLKVALRCTLPASERPDMKTVFEDLSTIR 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2435 878 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Dere04g2435 878 Gene3D Ribonuclease Inhibitor 27 320 IPR032675 -
Dere04g2435 878 MobiDBLite consensus disorder prediction 610 648 - -
Dere04g2435 878 SUPERFAMILY Protein kinase-like (PK-like) 736 874 IPR011009 -
Dere04g2435 878 SUPERFAMILY L domain-like 30 311 - -
Dere04g2435 878 MobiDBLite consensus disorder prediction 625 648 - -
Dere04g2435 878 ProSiteProfiles Protein kinase domain profile. 579 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2435 878 SMART LRR_typ_2 270 294 IPR003591 -
Dere04g2435 878 SMART LRR_typ_2 122 145 IPR003591 -
Dere04g2435 878 SMART LRR_typ_2 387 411 IPR003591 -
Dere04g2435 878 SMART LRR_typ_2 491 515 IPR003591 -
Dere04g2435 878 SMART LRR_typ_2 146 169 IPR003591 -
Dere04g2435 878 SMART LRR_typ_2 170 193 IPR003591 -
Dere04g2435 878 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 220 - -
Dere04g2435 878 SUPERFAMILY RNI-like 299 531 - -
Dere04g2435 878 Gene3D Ribonuclease Inhibitor 386 459 IPR032675 -
Dere04g2435 878 Gene3D Ribonuclease Inhibitor 321 385 IPR032675 -
Dere04g2435 878 Gene3D Ribonuclease Inhibitor 460 540 IPR032675 -
Dere04g2435 878 Pfam Protein tyrosine and serine/threonine kinase 738 836 IPR001245 GO:0004672|GO:0006468
Dere04g2435 878 Gene3D Transferase(Phosphotransferase) domain 1 731 877 - -
Dere04g2435 878 Pfam Leucine rich repeat N-terminal domain 28 72 IPR013210 -
Dere04g2435 878 PANTHER OS07G0626500 PROTEIN 17 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2435 Dere-ChrDere04 30424526 30429942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2435 9 836 Receptor kinase-like Gene Family AT5G62230 26.818 1.37e-55 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere04g2435 PK_Tyr_Ser-Thr 1.6e-08 CL0016