Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2417 ATGGAGATCAAGAGAAAAACTGTCCTATGCTTACTGATGGCCATGGCAATGGGTTTTTTCTGCATCGAGAGCAGAGATCCTGTGATGCACAGGGTTGGAGGAGGAAGGTATACTTGGGCACCAAAAGTTAATTTCACAAAGTGGACTTGTCATGATCACTTCTACAAGGGTGACTGGCTGTATTTTGGTTTTGACAAGCAACTCTACAATGTTCTGGAGGTCAACAAAACAAGCTATGACAACTGCACTGAAACAGATTTCATCAAGAACATCACAAGAGGAGGGAGAGATGTGTTTCAGCTCTTGGAGGCAAAAACATATTATTTCATTAGTGGCCGAGGATTTTGCTTTAAGGGCATGAAAGTTGCAATAACCGTTGAAGAGCTCCCACCAGAACCACCAACATTTGTTATGACCAGCAAGGCTTTCCCATTTAGCAAACAAAACCATACTGTACTCCCTGTGCTAATGGCCACAGCTTGGGCCTTGACCTACATCTAG 501 0.4351 MEIKRKTVLCLLMAMAMGFFCIESRDPVMHRVGGGRYTWAPKVNFTKWTCHDHFYKGDWLYFGFDKQLYNVLEVNKTSYDNCTETDFIKNITRGGRDVFQLLEAKTYYFISGRGFCFKGMKVAITVEELPPEPPTFVMTSKAFPFSKQNHTVLPVLMATAWALTYI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2417 166 PANTHER BLUE COPPER PROTEIN 29 138 IPR039391 GO:0009055
Dere04g2417 166 SUPERFAMILY Cupredoxins 29 126 IPR008972 -
Dere04g2417 166 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Dere04g2417 166 FunFam Lamin-like protein 26 129 - -
Dere04g2417 166 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
Dere04g2417 166 Gene3D - 28 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2417 Dere-ChrDere04 30194681 30195265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2417 6 157 Phytocyanin Superfamily AT2G27035 50.000 5.02e-53 164