Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2414 ATGTCTCCTAATGAATTCGAATTCGCTGAACTTCATGAGCGATTTTATGTTGGCGATTGGGTATACTTTGGATATGACATAAACCTCTACAACGTGCTGGTGGTAAACAAGAGCAGCTATGAGAATTGCATAGACTCAGGATTCATCAGCAACCTAACAAGGGGTGGAAGAGATGTGTTCCAACTCAAAGAGGCCAAATTCTACTACTTCTTGAGTGGAAGAGGTTGCTGCTGGGAGGGAATGAAGGTTGCTATAGATGTTGTGCATGATGCACAACCCTCTCTCCCACCACTTCCTCCCACAAGTACTGCTTCTCCTTCACGTTTCTGTTCCATTCTGGTGCTGCTTCTCTCAGCCTTGGTGTGGAGCACTTTGACTAAGTAG 384 0.4531 MSPNEFEFAELHERFYVGDWVYFGYDINLYNVLVVNKSSYENCIDSGFISNLTRGGRDVFQLKEAKFYYFLSGRGCCWEGMKVAIDVVHDAQPSLPPLPPTSTASPSRFCSILVLLLSALVWSTLTK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2414 127 Gene3D - 4 88 IPR008972 -
Dere04g2414 127 PANTHER BLUE COPPER PROTEIN 13 96 IPR039391 GO:0009055
Dere04g2414 127 Pfam Plastocyanin-like domain 13 81 IPR003245 GO:0009055
Dere04g2414 127 ProSiteProfiles Phytocyanin domain profile. 1 89 IPR003245 GO:0009055
Dere04g2414 127 SUPERFAMILY Cupredoxins 13 88 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2414 Dere-ChrDere04 30167387 30169445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2414 12 121 Phytocyanin Superfamily AT2G27035 51.304 1.12e-34 116