Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2382 ATGAGGAAGAAACTTGATACTCGTTTCCCTGCTGCTCGGATTAAGAAAATTATGCAAGCTGATGAGGACGTAGGGAAGATTGCTATGGCTGTGCCTCTTCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAGATTTATGTGATCGGACATATGAGATAACATTGAGGAGAGGGGCAAAGACCATGAATTCTTTTCATTTAAAGCAGTGTGTACAGACTTTTAATGTCTTCGATTTTCTGAAAGATATTGTCAGCAAAGTTCCTGATTTAGGTGGTCATGTTGCTTCTGGTGATGATCGTACTGTCTGTAAGAGGAGGAAAGTTGATGATGATGGAAATGACAGCGATGAAGATACAAAAAGAAATACAATGCCTGAACATGCACATCATACTGGGGGTAGAGGAAGAGGTCGGGGCAGAGGCAGGGGTCGTGGGCGAGGAAGTAGAACAACAGTAGATCGGGAGGTGACTGCACATGTCAAGTCTGAAGATGATAATCATCCTGATGGTTTGAAGCAAAATGACATGCATACTCAAAGCAATGAAAGCATGGAATACAGCACAGAACATGAAGAAGTAAAGCCTCCTGTTAGCAAAACATCATCAGAAATGTGCATTAGAAATTTTGACTTAAATATGGACCCAGATGAGGACGAGGATTCGCCAACCAGTTTAGCTCCTGTTCCACTTTGTTCATTGGCAAAACCAACTACAGAATTGAAGCACGAGGAATTCCCTGGTTGGTCGTTGTCTGATGTAGAAAAAATGGCCATTTATCCCATGCAACTGGTCAACATAAATGGAAGGATTGATGAAGATGAGGAAGATTATGATGAAGAAAGTTAG 846 0.4137 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGGHVASGDDRTVCKRRKVDDDGNDSDEDTKRNTMPEHAHHTGGRGRGRGRGRGRGRGSRTTVDREVTAHVKSEDDNHPDGLKQNDMHTQSNESMEYSTEHEEVKPPVSKTSSEMCIRNFDLNMDPDEDEDSPTSLAPVPLCSLAKPTTELKHEEFPGWSLSDVEKMAIYPMQLVNINGRIDEDEEDYDEES 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2382 281 MobiDBLite consensus disorder prediction 105 201 - -
Dere04g2382 281 MobiDBLite consensus disorder prediction 146 172 - -
Dere04g2382 281 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Dere04g2382 281 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Dere04g2382 281 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Dere04g2382 281 FunFam dr1-associated corepressor homolog 1 86 - -
Dere04g2382 281 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 126 - -
Dere04g2382 281 MobiDBLite consensus disorder prediction 105 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2382 Dere-ChrDere04 29579755 29582905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2382 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 69.173 8.44e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dere04g2382 CBFD_NFYB_HMF 3.6e-18 CL0012