Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2369 ATGGGTTGGAGATGGTGCTGTGTCCTCCAGGTTCTTCTGCTTGCTCCATTCATGGGTTCTTCACGTTCAATTATCAGGAGTTTACCTGGCTATTCTGGTGATCTGCCTTTCAAGCTCGAAAGTGGATACATAGGAGTGGGAGAAAAGGAGGATGTGCAATTATTTTACTTATTTGTGGAATCTCAAAGAAATCCCTCAAAAGATCCACTACTACTTTGGTTCGTTGGAGGTCCTGGTTGCTCTGGACTTTCTGCGTTTTTCTTTGAAAATGGACCAGTTACATTTGACCGCAATTACAGTGGGAATTTTCCCAAACTTGAACTAAACCCTTATGCTTGGACACAGATACTCAACGTCATATACCTAGATATACCAGTGGGCACTGGATTTTCTTACTCACAAACCCAAGATGGCTTCCATAGCAATGATACACTATGGGTAGAGCATGCACATGATTTTCTACAAAAGGGTTTTGTGCTTGCGAGCCCACTAACTGATAAGTATCTTGATGGCAACTCGAGAGTTGTTTATGCACACCAAATGAGTCTTATATCAGATGAGCTCTATGAGTCAATTAAAGCAAGTTGTGGTGGTAATTATGTGAACATCAACCCAAACAACACAAAATGTGTCTTAGATTATGAAGCATACTCTCGTCTGATTCGTTATATAAATGTGAATCAAATTTTGGAACCTGCCTGTATTACTACTCCCAATGAGAATAAAAGAATTCTCTTGAAAGATTCATCAGAAGGAATCATCCACTCTTTACGAAATATTGGAGCATTCTGGTGTCGTGGTTACGATCACATACTTGTTAATGCATGGGCAAATGATAAGGATGTAAGGAAGGCTCTTCATATTAGAGAGGGAACTAAGCCAGAGTTCGAGAGATGCAACAAGAGTTTGTCATACACAACAAATCTACATAGTGTTGTTGATTATCATCGCAGCCTCACTAACACAAACCTTCAATCTCTTGTATATGGTGCTGATCTTGACTTGTCGATACCGCAAATTGGTACACGAAGTTGGATAAAGTCATTGAACTTGAAAATAGCAGATCCTTGGCGTGCTTGGTTTGTTGATGGTCAAGTTGCCGGATACACACAAATTTACAAGAAACACAACTACTACTTGACATACGTGGCTGTGAAAGGTGCAGGTCATGTAGCCCAAACATATAAACCTAAAGAAGTTTACCAAATGATTGACAGGTGGTTCTCATATTCTCTTATTTAA 1242 0.3969 MGWRWCCVLQVLLLAPFMGSSRSIIRSLPGYSGDLPFKLESGYIGVGEKEDVQLFYLFVESQRNPSKDPLLLWFVGGPGCSGLSAFFFENGPVTFDRNYSGNFPKLELNPYAWTQILNVIYLDIPVGTGFSYSQTQDGFHSNDTLWVEHAHDFLQKGFVLASPLTDKYLDGNSRVVYAHQMSLISDELYESIKASCGGNYVNINPNNTKCVLDYEAYSRLIRYINVNQILEPACITTPNENKRILLKDSSEGIIHSLRNIGAFWCRGYDHILVNAWANDKDVRKALHIREGTKPEFERCNKSLSYTTNLHSVVDYHRSLTNTNLQSLVYGADLDLSIPQIGTRSWIKSLNLKIADPWRAWFVDGQVAGYTQIYKKHNYYLTYVAVKGAGHVAQTYKPKEVYQMIDRWFSYSLI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2369 413 Pfam Serine carboxypeptidase 29 156 IPR001563 GO:0004185|GO:0006508
Dere04g2369 413 SUPERFAMILY alpha/beta-Hydrolases 25 409 IPR029058 -
Dere04g2369 413 PRINTS Carboxypeptidase C serine protease (S10) family signature 380 393 IPR001563 GO:0004185|GO:0006508
Dere04g2369 413 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Dere04g2369 413 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Dere04g2369 413 Gene3D alpha/beta hydrolase 19 157 IPR029058 -
Dere04g2369 413 Gene3D alpha/beta hydrolase 158 245 IPR029058 -
Dere04g2369 413 FunFam Carboxypeptidase 264 412 - -
Dere04g2369 413 Gene3D - 265 411 - -
Dere04g2369 413 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 156 397 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2369 Dere-ChrDere04 29096261 29109615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2369 272 409 Calmodulin-binding Proteins AT2G22960 40.580 5.86e-33 120