Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2368 ATGGGATGACCAGTTACATTTGACCGCAATTACAGTGGGAATTTTCCAAGACTTGAACTAAACCCTTATGCTTGGACAAAGATACTCAACATCATATACATAGATATACCAGTGGGCACTGGATTTTCTTACTCACAAACCCAAGATGGCTTCCATAGCAATGATACACTATGGATAGAGCATGCACATGATTTTCTACAAAAGTGGTTTATTGATCATCCTGAGTTTAGCTCAAATCCATTTTACATTGGTGGTGGTTCATATTCAACTCTGCCTAGTGTTCCCCTTATTAAAAAAGTATATGAAGGTTATAAAGCAGGAAGCAATCCACTCATGAATATCAAAGGTTTTGTGCTCGCGAGCCCAGTAACTGATATGTATCTAGACGGCAACTCGAGAGTTGTTTATGCACACCAGATGAGTCTTATATCAGATGAGCTCTATGAGTCAATTAAAGCAAGTTGTGGTGGTAATTACGTGAACATTGATCCAAATAACACAAAGTGCGTCTTAGATTATCAAGCATACTATCGTCTAATTCGTCATATAAATGTGGATCAAATTCTAGAACCTGCCTGTATTACTACTCCTAAAGTGAATAAAAGAATTCTTTTGAAAGATTCATCAGAAGGAATCCTCCAATCGTTTCAAAATATTGGAGCATTCTGGTGTCGTGGTTATGATCACATACTTGTTAATGCATGGGCAAATGATAAGGATGTAAGAAAGGCTCTTCATATTAGGGAGGGAACCAAATTAGAGTTCGAGAGATGCAACGAGAGTTTATCATACACAACGAATCGACTTAGTGCTGTTGATATTCATCGTAGCCTCACTAACACAAACCTTCAGTCTCTTGTATACGGTGCTGATCTTGACATGGCGATACCGCAAATTGGTACACGAAGTTGGATAAAGTTATTGAACTTGAAAATAGCGGATCCTTGGCGTGCTTGGTTTGTTGATGGTCAAGTTGCCGGATACACACAAATCTACAAGAAACACAACTACTACTTGACATATGTTGCTGTGAAAGGTGCTGGTCATGTAGCCCAAAAATATAAACCTAAAGAAGTTTATCAAATGATTGACAGGTGGTTCTCATATTCTCTTATTTAA 1119 0.3798 MGXPVTFDRNYSGNFPRLELNPYAWTKILNIIYIDIPVGTGFSYSQTQDGFHSNDTLWIEHAHDFLQKWFIDHPEFSSNPFYIGGGSYSTLPSVPLIKKVYEGYKAGSNPLMNIKGFVLASPVTDMYLDGNSRVVYAHQMSLISDELYESIKASCGGNYVNIDPNNTKCVLDYQAYYRLIRHINVDQILEPACITTPKVNKRILLKDSSEGILQSFQNIGAFWCRGYDHILVNAWANDKDVRKALHIREGTKLEFERCNESLSYTTNRLSAVDIHRSLTNTNLQSLVYGADLDMAIPQIGTRSWIKLLNLKIADPWRAWFVDGQVAGYTQIYKKHNYYLTYVAVKGAGHVAQKYKPKEVYQMIDRWFSYSLI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2368 372 Gene3D alpha/beta hydrolase 3 371 IPR029058 -
Dere04g2368 372 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 356 IPR001563 GO:0004185|GO:0006508
Dere04g2368 372 Pfam Serine carboxypeptidase 16 368 IPR001563 GO:0004185|GO:0006508
Dere04g2368 372 PRINTS Carboxypeptidase C serine protease (S10) family signature 69 94 IPR001563 GO:0004185|GO:0006508
Dere04g2368 372 PRINTS Carboxypeptidase C serine protease (S10) family signature 21 33 IPR001563 GO:0004185|GO:0006508
Dere04g2368 372 PRINTS Carboxypeptidase C serine protease (S10) family signature 339 352 IPR001563 GO:0004185|GO:0006508
Dere04g2368 372 PRINTS Carboxypeptidase C serine protease (S10) family signature 34 44 IPR001563 GO:0004185|GO:0006508
Dere04g2368 372 SUPERFAMILY alpha/beta-Hydrolases 12 368 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2368 Dere-ChrDere04 29054777 29067110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2368 235 368 Calmodulin-binding Proteins AT2G22960 41.045 7.15e-32 117