Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2365 ATGATATATTCAGAACTGCGAAGTACCCTCGTTACCGCCATGGGTTGGAGATGTAGTTGTGTCATCCTGGTTCTGCTGCTTGTTCCATTCATGGCTTCTTCACGTTCAATTATCAAAAGTTTACCTGGCTACCCTGGTGATCTGCCATTCAAGCTTGAAAGTGGATACATAGGAGTGGGAGAAGAAGAGGATGTGCAATTATTTTACATGTTTGTGGAGTCTCAAAGAAATCCTACAGAAGATCCACTCCTACTTTGGTTCGTTGGTGGCCCTGGTTGCTCTGCTTTTTCTGCATTTTTTTACGAAAATGGGCCAGTAAGATTTGTCCGCAATTATAGTTGGAATCTTCCGACACTTGAACCAAACCCCTATGCTTGGACGCAGATACTCAACGTCATATACATTGATATACCAGTAGGCACTGGTTTTTCTTACTCGCAAACACAAGATGGCTTCCATAGCAGTGATACATTATGGGTAGAGCATGCATATGATTTTCTACAAAAGTGGTTCATTGATCATTCTGAGTTTAGCTCAAATCCTTTTTATATTGGTGCTGGTTCGTATGCTGGTCTACCTAGTGTTCCCCTTATTAAAAAAGTATATGAAGGTTACAAAGCAGGAAGCAATCCAATCATGAACATCAAAGGTCTTGTGCTTGCAAGCCCACTAACTGATATGTATCTGGACGGAAACTCACAGTTTGTTTATGCACACCAAATGGGTCTTATATCAGATGAGCTCTATGAGTCAATTAAAGCGAATTGTGGTGGTGATATTGTGAACATTAATCCAAACAACACAAAGTGCCTCTTAAATTTTGAAACTTTTGTTCGTATGCGTCGTTATATAAATATAGAACAAATATTGGAACCAAATTGTATTACTACTCCCAAAGTGAATGAAAGAATTCTCTTGAAAGATTCATTTGAAGGAATCCACCAATCATTACTGAAAATTGGAGCATTCTGGTGTCGTGGTTATGATATGATACTAATTCATGTGTGGGCAAATGATGAGAACGTTAGGAAGGCACTTCACATTAGGGAGGGAACTGCATCAGAGTTCCAGAGATGCAACGCCAGCTTATCATACGCAAAGGATTTATATAGTGTTGTTGATTATCATCGCAGTCTCACAAGCACAAACCTTCGGTCTCTTATATACGGTGCTGATCTTGACTTCCTGATACCACAAATTGGCGCACGAACATGGATTAGGTCGTTGAACTTGAAAATTGCAGATCCATGGCGTGCATGGTTTGTTGATGGTCAAGTTGCCGGATACACACAAATTTACAAGAAACATGACTACTACTTGACATACGGGTCTGTGAAAGGTGCTGGTCATGTAGCCCATAAATTTAAACCTAAAGAAGTTTACCAAATGATAAAGAGGTGGTTCTCATATTCTCTTATTTAA 1422 0.3959 MIYSELRSTLVTAMGWRCSCVILVLLLVPFMASSRSIIKSLPGYPGDLPFKLESGYIGVGEEEDVQLFYMFVESQRNPTEDPLLLWFVGGPGCSAFSAFFYENGPVRFVRNYSWNLPTLEPNPYAWTQILNVIYIDIPVGTGFSYSQTQDGFHSSDTLWVEHAYDFLQKWFIDHSEFSSNPFYIGAGSYAGLPSVPLIKKVYEGYKAGSNPIMNIKGLVLASPLTDMYLDGNSQFVYAHQMGLISDELYESIKANCGGDIVNINPNNTKCLLNFETFVRMRRYINIEQILEPNCITTPKVNERILLKDSFEGIHQSLLKIGAFWCRGYDMILIHVWANDENVRKALHIREGTASEFQRCNASLSYAKDLYSVVDYHRSLTSTNLRSLIYGADLDFLIPQIGARTWIRSLNLKIADPWRAWFVDGQVAGYTQIYKKHDYYLTYGSVKGAGHVAHKFKPKEVYQMIKRWFSYSLI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2365 473 FunFam Serine carboxypeptidase-like 19 31 300 - -
Dere04g2365 473 Pfam Serine carboxypeptidase 42 469 IPR001563 GO:0004185|GO:0006508
Dere04g2365 473 FunFam Carboxypeptidase 324 472 - -
Dere04g2365 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 456 IPR001563 GO:0004185|GO:0006508
Dere04g2365 473 Gene3D - 326 471 - -
Dere04g2365 473 SUPERFAMILY alpha/beta-Hydrolases 38 469 IPR029058 -
Dere04g2365 473 Gene3D alpha/beta hydrolase 32 305 IPR029058 -
Dere04g2365 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Dere04g2365 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Dere04g2365 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Dere04g2365 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2365 Dere-ChrDere04 28933577 28955274 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2365 336 469 Calmodulin-binding Proteins AT2G22960 44.030 8.16e-35 126