Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2363 ATGATATATTCAGAACTGCGAAGATACAGTACCCTCGTTACCGCCATGGGTTGGAGATGTAGTTGTGTCATCCTGGTTCTGCTGCTTGTTCCATTCATGGCTTCTTCACGTTCAATTATCAAAAGTTTACCTGGCTACCCTGGTGATCTGCCATTCAAGCTTGAAAGTGGATACATAGGAGTGGGAGAAGAAGAGGATGTGCAATTATTTTACATGTTTGTGGAGTCTCAAAGAAATCCTACAGAAGATCCACTCCTACTTTGGTTCGTTGGTGGCCCTGGTTGCTCTGCGTTTTCTGCATTTTTTTACGAAAATGGGCCAGTAAGATTTGTCCGCAATTATAGTTGGAATCTTCCGACACTTGAACCAAACCCCTATGCTTGGACGCAGATACTCAACGTCATATACATTGATATACCAGTAGGCACTGGTTTTTCTTACTCGCAAACACAAGATGGCTTCCATAGCAGTGATACATTATGGGTAGAGCATGCATATGATTTTCTACAAAAGTGGTTCATTGATCATTCTGAGTTTAGCTCAAATCCTTTTTATATTGGTGCTGGTTCGTATGCTGGTCTACCTAGTGTTCCCCTTATTAAAAAAGTATATGAAGGTTACAAAGCAGGAAGCAATCCAATCATGAACATCAAAGGTCTTGTGCTTGCAAGCCCACTAACTGATATGTATCTGGACGGAAACTCACAGTTTGTTTATGCACACCAAATGGGTCTTATATCAGATGAGCTCTATGAGTCAATTAAAGCGAATTGTGGTGGTGATATTGTGAACATTAATCCAAACAACACAAAGTGCCTCTTAAATTTTGAAACTTTTGTTCGTATGCGTCGTTATATAAATATAGAACAAATATTGGAACCAAATTGTATTACTACTCCCAAAGTGAATGAAAGAATTCTCTTGAAAGATTCATTTGAAGGAATCCACCAATCATTACTGAAAATTGGAGCATTCTGGTGTCGTGGTTATGATATGATACTAATTCATGTGTGGGCAAATGATGAGAACGTTAGGAAGGCACTTCACATTAGGGAGGGAACTGCATCAGAGTTCCAGAGATGCAACGCCAGCTTATCATACGCAAAGGATTTATATAGTGTTGTTGATTATCATCGCAGTCTCACAAGCACAAACCTTCGGTCTCTTATATACGGTGCTGATCTTGACTTCCTGATACCACAAATTGGCGCACGAACATGGATTAGGTCGTTGAACTTGAAAATTGCAGATCCATGGCGTGCATGGTTTGTTGATGGTCAAGTTGCCGGATACACACAAATTTACAAGAAACATGACTACTACTTGACATACGGGTCTGTGAAAGGTGCTGGTCATGTAGCCCATAAATTTAAACCTAAAGAAGTTTACCAAATGATAAAGAGGTGGTTCTCATATTCTCTTATTTAA 1428 0.3964 MIYSELRRYSTLVTAMGWRCSCVILVLLLVPFMASSRSIIKSLPGYPGDLPFKLESGYIGVGEEEDVQLFYMFVESQRNPTEDPLLLWFVGGPGCSAFSAFFYENGPVRFVRNYSWNLPTLEPNPYAWTQILNVIYIDIPVGTGFSYSQTQDGFHSSDTLWVEHAYDFLQKWFIDHSEFSSNPFYIGAGSYAGLPSVPLIKKVYEGYKAGSNPIMNIKGLVLASPLTDMYLDGNSQFVYAHQMGLISDELYESIKANCGGDIVNINPNNTKCLLNFETFVRMRRYINIEQILEPNCITTPKVNERILLKDSFEGIHQSLLKIGAFWCRGYDMILIHVWANDENVRKALHIREGTASEFQRCNASLSYAKDLYSVVDYHRSLTSTNLRSLIYGADLDFLIPQIGARTWIRSLNLKIADPWRAWFVDGQVAGYTQIYKKHDYYLTYGSVKGAGHVAHKFKPKEVYQMIKRWFSYSLI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2363 475 FunFam Carboxypeptidase 326 474 - -
Dere04g2363 475 Pfam Serine carboxypeptidase 44 471 IPR001563 GO:0004185|GO:0006508
Dere04g2363 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 458 IPR001563 GO:0004185|GO:0006508
Dere04g2363 475 SUPERFAMILY alpha/beta-Hydrolases 40 471 IPR029058 -
Dere04g2363 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Dere04g2363 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Dere04g2363 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Dere04g2363 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Dere04g2363 475 FunFam Serine carboxypeptidase-like 19 33 302 - -
Dere04g2363 475 Gene3D alpha/beta hydrolase 34 307 IPR029058 -
Dere04g2363 475 Gene3D - 328 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2363 Dere-ChrDere04 28873714 28895427 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2363 338 471 Calmodulin-binding Proteins AT2G22960 44.030 8.83e-35 126