Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2358 ATGGGTATCGATTGGAGATGGAGCTGTGTCATTCTGGTTCTACTGCTTGCTCCATTTATGGTTTCTTCACGTTCAATTATCAGAAGATTACCTGGCTACCCTGGTGATCTGCCGTTCAAGCTTGAAAGTGGATACATAGGAGTGGGAGAAGAAGAGGATGTGCAATTATTTTACTTGTTTGTGGAGTCTCAAAGAAATCCCTCAAAAGATCCACTCCTACTTTGGTTCGTTGGAGGCCCAGGTTGCTCTGCACTTTCAGCATTTTTTTTTGAAAATGAAGAGGTATCAGTTGTTCATCGTCACTGCTGCCTCACTTTTCTGCCTAAACCCTTATGCCTGAGCACTTGCACTCATGAGACTCTCATCCTCCTAAAATCCAACCCTTACTCTACTCAGCCTCCTCGTAGTTCCTTTTGCCACCTTCCTCCTCTATTTGGTGATTCTGGTGACCGACGTCTAGACCACTATGGCTTGCGGCACTGGTCCTCTGTTCATCGATTCCAATGGTGCAAGCTCGTCGAAGGATGGACTCCACATCGACCACAATGGAAGAAATCAAATCAGAAGGAATTCAGAGAAATACTGGAGAAACGGTTGACTCTGAACCCGTTTGGAGGACGGCCAGTGAGATTTGTCCGTAATTACGGTTGGAATTTTCCGACACTTGAACTAAACCCTTATGCTTGGACACAGATACTCAACATCATATTCATAGATATACCAGTGGGCTCTGGATTTTCTTATTCGCAAACACAAGATGGCTTCCATAGCAATGATACATTATGGGTAGACCATGCATATGATTTTCTACAAAAGTGGTTTATTGATCATCCTGACTTTAGCTCAAATCCATTTTATATTGGTGGTGGATCATATTCATGTCTACCTAGTGTTCCTCTTATTAAAAAAGTATATGAAGGTTACAAAGCCAGAAGCAATCCAATCATGAATATCAAAGGTTTTGTGCTCGCAAGCCCACTAGCAGATAGGGATATAAGGGAATACTCACAACTTGTTTATGCACACCAAATGAGTCTTATATCTGACGAACTCTATGAGTCAATTAAAGCGAGCTGTGGTATTGACTATGTGAACATTTATCCAAACAGCACAAAGTGTGACTTAGATTATGCAACTTTGTTTAACTTGCTTCGTTATATAAATATAGAGCAAATATTGGAACCAGTCTGTATTACTACTCCCAGAGAGAATGAAAGAATTCTCTTAAAAGATTCATTAGAAATAATCCACCAGTCATTACAGAATGATGGATCATTTTGGTGTCGTGGTTATGATATGATACTTGTTGATGTATGGGCAAATGATGAAAATGTTAGGAAGGCTCTTCATATTAGGGAGGATACTGCACTAGAGTTCCAGAGATGCAATGCTAGTTTATCATACACACAGAATATACAGAGTGTTCTTGATTATCATCGCAACCTCACAAGCACAAACCTTCAGTCTCTTGTATACGGTGCTGATCTTGACATGTCGGAACCAGAAATTGGCATACGAACTTGGATTAGGTCATTGAGCATGAAAATTGCTGATCCTTGGCGTGCATGGTTTGTTGATGGTCAAGTTGCGGGATACACACAGATCTACAAGAAACAAGACTATTACTTGACATATGCGTCTGTGAAAGGTGCTGGTCATGTAGCCCATATATATAAACCTAAAGAAGTCTACCAATTGATAAAGAGGTGGTTCTCATATTCTCTTTTCTAA 1731 0.4044 MGIDWRWSCVILVLLLAPFMVSSRSIIRRLPGYPGDLPFKLESGYIGVGEEEDVQLFYLFVESQRNPSKDPLLLWFVGGPGCSALSAFFFENEEVSVVHRHCCLTFLPKPLCLSTCTHETLILLKSNPYSTQPPRSSFCHLPPLFGDSGDRRLDHYGLRHWSSVHRFQWCKLVEGWTPHRPQWKKSNQKEFREILEKRLTLNPFGGRPVRFVRNYGWNFPTLELNPYAWTQILNIIFIDIPVGSGFSYSQTQDGFHSNDTLWVDHAYDFLQKWFIDHPDFSSNPFYIGGGSYSCLPSVPLIKKVYEGYKARSNPIMNIKGFVLASPLADRDIREYSQLVYAHQMSLISDELYESIKASCGIDYVNIYPNSTKCDLDYATLFNLLRYINIEQILEPVCITTPRENERILLKDSLEIIHQSLQNDGSFWCRGYDMILVDVWANDENVRKALHIREDTALEFQRCNASLSYTQNIQSVLDYHRNLTSTNLQSLVYGADLDMSEPEIGIRTWIRSLSMKIADPWRAWFVDGQVAGYTQIYKKQDYYLTYASVKGAGHVAHIYKPKEVYQLIKRWFSYSLF 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2358 576 Gene3D alpha/beta hydrolase 21 130 IPR029058 -
Dere04g2358 576 Gene3D alpha/beta hydrolase 204 399 IPR029058 -
Dere04g2358 576 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 560 IPR001563 GO:0004185|GO:0006508
Dere04g2358 576 SUPERFAMILY alpha/beta-Hydrolases 216 572 IPR029058 -
Dere04g2358 576 Gene3D - 429 574 - -
Dere04g2358 576 SUPERFAMILY alpha/beta-Hydrolases 27 92 IPR029058 -
Dere04g2358 576 Pfam Serine carboxypeptidase 31 92 IPR001563 GO:0004185|GO:0006508
Dere04g2358 576 Pfam Serine carboxypeptidase 220 572 IPR001563 GO:0004185|GO:0006508
Dere04g2358 576 PRINTS Carboxypeptidase C serine protease (S10) family signature 238 248 IPR001563 GO:0004185|GO:0006508
Dere04g2358 576 PRINTS Carboxypeptidase C serine protease (S10) family signature 225 237 IPR001563 GO:0004185|GO:0006508
Dere04g2358 576 PRINTS Carboxypeptidase C serine protease (S10) family signature 273 298 IPR001563 GO:0004185|GO:0006508
Dere04g2358 576 PRINTS Carboxypeptidase C serine protease (S10) family signature 543 556 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2358 Dere-ChrDere04 28735783 28752269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2358 435 572 Calmodulin-binding Proteins AT2G22960 42.029 1.19e-32 122