Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2356 ATGACAATCATATTAACGCCCAAACGATCCGATTATCTCCCAACGGTCGCTTCTGCTTTCGCTTGCTGCCATTCACAACCGATTGATCAAGAAATCGATCGCTGCATTTCAAGAACCACATTGAAGGTGAAGTACCCTAATTACTGCTACGGTATGGGTTGGAGATGGAGCTGTCTCGTCCTGGTTCTACTGCTTGCTCCATTCATGGCTTCTTCACGTTCAATTATCAGAAGTTTACCTGGCTACCCTGGTGATCTGCCGTTCAAGCTTGAAAGTGGATATATAGGAGTGGGAGAAAAAGAGGATGTGCAATTATTTTACTTATTTGTGGAGTCTCAAAGAAATCCCTCAAATGATCCACTCCTACTTTGGCTTGTTGGAGGCCCTGGTTGCTCTGCACTTTCTGCTTTTTTTTTCGAAAATGGGCCAGTAACATTTGTCCGCAATTACAGTCAGAATCTTCCGAAACTTGAACTAAACCCTTACGGTTGGTCGCAGATACTCAACGTCATATATATTGATATACCAGTGGGCACTGGATTTTCTTACTCACAAACACAAGATGGCTTTCATAGTAGTGATACACAATGGGTAGAGCACGCATATGATTTTCTACAGAAGTGGTTCATTGATCATCGAGAGTTTAGCTCAAATCCATTTTATGTCGGTGCTGGTTCGTATGCAACTCTACCTACTGTTCCCCTTATTAAAAAAGTATATGAAGGTTACAAAGCAGGAAGCAATGTCATGAATATCAAAGGTTTTGTGCTCGCGAGCCCACTAGCTGACAAGTATTTGAACGGAAACTCACTTGTTGTTTATGCACACCAAATGAGTCTTATATCAGATGAGCTCTACGAGTCAATTAAAGCGAGTTGTGGTGGTGATTATGTGAACATTAATCCAAACAACACAAAGTGCGTCTTAGATTATGAAGCTTTCTTTCATCTAGTTCGTTATATAAATCCGCTACAAATATTCGAACCGATTTGTATTACTACTCCCAAAGAGAATGAAAGAATTCTCCTGAAAGATTCATTAGAAGGAATACAGCAGTCATTACTGAATAGTGGAGCATTCTGGTGTCGTGGTTATGATCATTTACTTATTAATGCATGGGCAAATGATGAGAATGTTCGGAAGGCTCTTCATATTAGGGAGGGAACAACACCAGAGTTTCAGAGATGCAATACCAGTTTATCATACACACGGAATATACATGCTGTTGTTGATTATCTTCACAATCTCACAAGCACAAACCTTCAGTCTCTTGTGTACGGTGCTGATCTTGACTTTATGGTACCACAAATTGGCACACGAACTTCGATTAGGTCATTGAACTTAACAATTGCAGATCCTTGGCATGTATGGTTTGTTGACGGTCAAGTTGCCGGATACGTACAAATTTACAAGAAACATGACTACTACTTGACATATGTGTCTGTGAAAGATGCTGGTCATGTGGCTCATATATATAAACCTAAAGAAGTTTACCAAATGATAGACAGGTGGTTCTCATATTCTCTTATTTAA 1533 0.3992 MTIILTPKRSDYLPTVASAFACCHSQPIDQEIDRCISRTTLKVKYPNYCYGMGWRWSCLVLVLLLAPFMASSRSIIRSLPGYPGDLPFKLESGYIGVGEKEDVQLFYLFVESQRNPSNDPLLLWLVGGPGCSALSAFFFENGPVTFVRNYSQNLPKLELNPYGWSQILNVIYIDIPVGTGFSYSQTQDGFHSSDTQWVEHAYDFLQKWFIDHREFSSNPFYVGAGSYATLPTVPLIKKVYEGYKAGSNVMNIKGFVLASPLADKYLNGNSLVVYAHQMSLISDELYESIKASCGGDYVNINPNNTKCVLDYEAFFHLVRYINPLQIFEPICITTPKENERILLKDSLEGIQQSLLNSGAFWCRGYDHLLINAWANDENVRKALHIREGTTPEFQRCNTSLSYTRNIHAVVDYLHNLTSTNLQSLVYGADLDFMVPQIGTRTSIRSLNLTIADPWHVWFVDGQVAGYVQIYKKHDYYLTYVSVKDAGHVAHIYKPKEVYQMIDRWFSYSLI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2356 510 Pfam Serine carboxypeptidase 80 506 IPR001563 GO:0004185|GO:0006508
Dere04g2356 510 SUPERFAMILY alpha/beta-Hydrolases 76 506 IPR029058 -
Dere04g2356 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Dere04g2356 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 477 490 IPR001563 GO:0004185|GO:0006508
Dere04g2356 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Dere04g2356 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Dere04g2356 510 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 75 494 IPR001563 GO:0004185|GO:0006508
Dere04g2356 510 Gene3D - 362 508 - -
Dere04g2356 510 FunFam Serine carboxypeptidase-like 19 69 337 - -
Dere04g2356 510 Gene3D alpha/beta hydrolase 70 342 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2356 Dere-ChrDere04 28678762 28699376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2356 373 506 Calmodulin-binding Proteins AT2G22960 41.045 1.39e-28 110